Pairwise Alignments

Query, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

Subject, 694 a.a., DNA ligase (NAD(+)) (EC 6.5.1.2) from Variovorax sp. SCN45

 Score =  656 bits (1692), Expect = 0.0
 Identities = 351/686 (51%), Positives = 466/686 (67%), Gaps = 23/686 (3%)

Query: 3   DVAQRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLRV 62
           + A+    L + LH H   YYV DAP +PDAEYD+L + L  +EA +P+L + DSP+ RV
Sbjct: 6   EAAREAAALSEQLHRHANLYYVLDAPELPDAEYDKLFQRLQAIEAEYPDLRTPDSPTQRV 65

Query: 63  GGRPLDAFESVVHEIPMLSLDNAFD--DGELESFYRRMTDRIPAVQHS---AFCCEPKLD 117
           GG+ LD F  V H++PMLS+    D   G   +F  R+   +   +     A+ CE K D
Sbjct: 66  GGKVLDGFTKVRHKVPMLSIRTETDITPGGASAFDARVRKELGLAEDGPQVAYVCELKFD 125

Query: 118 GLAVSLLYENGVLTRAATRGDGTTGENITENVRTIKSIPLRLQGADFPTRLEVRGEVFMP 177
           GLA++L YENGVL +AATRGDG  GE +T+N+RT++ IPLRL G   P  +EVRGEV+M 
Sbjct: 126 GLAMNLRYENGVLVQAATRGDGEVGEEVTQNIRTVREIPLRLNGKAPPV-VEVRGEVYMK 184

Query: 178 KAGFEALNAR------ALKKGEKQFVNPRNAAAGSLRQLDSKITAQRPLAFYAYSVGVI- 230
           +A F+ALN R      A +K EK FVNPRNAAAG++RQLD  I A RPL+F+AY +G + 
Sbjct: 185 RADFDALNERQREKIAAGQKNEKVFVNPRNAAAGAVRQLDPAIAAARPLSFFAYGLGEVT 244

Query: 231 ---EGGELATSHYQRFLQLKGWGLPICPETKLVTSLAEVKAFYQDILQRRQSLAYEIDGV 287
              EGG    + +    Q K WG P+  +T   T   E+ AF+++I ++R +L Y+IDGV
Sbjct: 245 PASEGGPDCPTQFDWLAQFKAWGFPVAQQTARATGAIELIAFHENIGRQRDALPYDIDGV 304

Query: 288 VIKVDDIQLQERLGFVARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVF 347
           V KVD I+LQ +LGFV R PRWA+A+K+PAQE+LT +  +E QVGRTG +TPVAKL PVF
Sbjct: 305 VYKVDSIELQRQLGFVTREPRWAVAHKYPAQEQLTEVLGIEIQVGRTGKLTPVAKLAPVF 364

Query: 348 VGGVTVSNATLHNADEIERLGVMVGDTVVIRRAGDVIPQIVSVVLER--RPENAKSIVF- 404
           VGGVTV+NATLHN DE  R  V VGDTV++RRAGDVIP++V VV E   +P++ +  +F 
Sbjct: 365 VGGVTVTNATLHNEDEARRKDVRVGDTVIVRRAGDVIPEVVGVVPESLAKPDDQRGPLFT 424

Query: 405 -PTRCPVCQSDVERVEGEAVARCSGGLICQAQRKEALKHFVSRKAMDVEGLGDKVIEQLV 463
            P +CPVC S+  R EGE   RC+GGL C AQRKEA+ HF +R+A+DV+GLGDK++EQLV
Sbjct: 425 MPHKCPVCGSEAVREEGEVDYRCTGGLFCAAQRKEAILHFAARRAVDVDGLGDKLVEQLV 484

Query: 464 DREMVSTPADLFRLRAGELTILERMGPKSAQNVIDALNKAKQTTLPKFLYALGIREVGEA 523
           D  ++ T  DL++L    L  L+RM  KSA+N++DAL  +K+TTLP+FL+ LGIR VGE+
Sbjct: 485 DANLIRTLPDLYKLGFTTLAGLDRMAEKSAKNLVDALEASKKTTLPRFLFGLGIRHVGES 544

Query: 524 TALNLAQHFLSLEAIQQASLEQFIEVPDVGVVVASHLQAFFAQDRNQQVINELLEQGITW 583
           TA +LA+HF  L+ I  A+ EQ +EV DVG VVA  L+ FF Q  N++V+ +L   G+TW
Sbjct: 545 TAKDLAKHFGKLDGIMDATEEQLLEVNDVGPVVAQSLRTFFDQPHNREVVEQLRACGLTW 604

Query: 584 PALTAAPVA-VDSALAGKIVVLTGSFTQLSRNDAKAALQALGAKVTGSVSKNTDMVFAGE 642
                 P A     LAG   V+TG+   L R++AK  L+A GAKV GSVSK T  + AGE
Sbjct: 605 E--EGEPEARAPKPLAGLTFVITGTLPTLGRDEAKDKLEAAGAKVAGSVSKKTHYLVAGE 662

Query: 643 AAGSKLAKATELGIQVFDEQALIEFL 668
            AGSKL KA E+G++V DE  ++E L
Sbjct: 663 DAGSKLDKAREIGVEVIDEARMLEIL 688