Pairwise Alignments

Query, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

Subject, 703 a.a., DNA ligase (NAD(+)) (EC 6.5.1.2) from Sphingobium sp. HT1-2

 Score =  558 bits (1438), Expect = e-163
 Identities = 323/690 (46%), Positives = 418/690 (60%), Gaps = 35/690 (5%)

Query: 2   SDVAQRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLR 61
           ++ A RL  L + + +H   Y+ +DAP I DA+YD L+RE   LEAA P L+ +DSP+ +
Sbjct: 10  AEAANRLMRLAREVAKHNRLYHDQDAPEISDADYDALIRENNALEAAFPHLIRADSPNAQ 69

Query: 62  VGGRPLDAFESVVHEIPMLSLDNAFDDGELESFYRRMTDRIPAVQHS--AFCCEPKLDGL 119
           VG     A + V H + M+SLDN F D ++  F  R+   +   + +  A   EPK+DGL
Sbjct: 70  VGATATSALKKVPHAVRMMSLDNGFADEDIAEFAARVRRFLALAEDAPVAMTAEPKIDGL 129

Query: 120 AVSLLYENGVLTRAATRGDGTTGENITENVRTIKSIPLRLQGADFPTRLEVRGEVFMPKA 179
           + SL YE G L  AATRGDGTTGE++T NVRTI  IP RL G   P   EVRGEV+M KA
Sbjct: 130 SCSLRYEQGELVLAATRGDGTTGEDVTANVRTIADIPQRLTGEVIPDLFEVRGEVYMAKA 189

Query: 180 GFEALNARALKKGE-----KQFVNPRNAAAGSLRQLDSKITAQRPLAFYAYSVGVIEGGE 234
            F ALN R L + E     +QF NPRNAAAGSLRQ D+ +TA RPL F A+  G      
Sbjct: 190 DFVALNQRLLDEAEDADKARQFANPRNAAAGSLRQKDASVTASRPLRFLAHGWGA-HSAL 248

Query: 235 LATSHYQRFLQLKGWGLPICPETKLVTSLAEVKAFYQDILQRRQSLAYEIDGVVIKVDDI 294
            A +       + GWGLP+      V S+  + A Y+ I + R  L ++IDGVV KVD +
Sbjct: 249 PADTQLGVMQAIAGWGLPVSDMLVCVDSIDAILAHYRAIERARADLPFDIDGVVYKVDRL 308

Query: 295 QLQERLGFVARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVGGVTVS 354
             Q+RLGFVA+APRWAIA+KFPA+   T L  ++ QVGRTG +TPV +L PV VGGV VS
Sbjct: 309 DWQQRLGFVAKAPRWAIAHKFPAERAQTTLEAIDIQVGRTGKLTPVGRLTPVTVGGVVVS 368

Query: 355 NATLHNADEIERLGVMVGDTVVIRRAGDVIPQIVSVVLERRPENAKSIVFPTRCPVCQSD 414
           N TLHNADEIERLGV  GD VV++RAGDVIPQ+V  +   R E  +   FPT CPVC S+
Sbjct: 369 NVTLHNADEIERLGVRPGDRVVVQRAGDVIPQVVDNL--TRDEVREPFPFPTHCPVCGSE 426

Query: 415 VERVEGEAVARCSGGLICQAQRKEALKHFVSRKAMDVEGLGDKVIEQLVDREMVSTPADL 474
             R E E   RC+GGLIC AQR E L+HFVSR A+D+EGLG+K IE+ +D   +  PAD+
Sbjct: 427 AVREEEEVDYRCTGGLICAAQRFERLRHFVSRAALDIEGLGEKTIEEFLDLGWIKEPADI 486

Query: 475 FRLR--AGELTILERMGPKSAQNVIDALNKAKQTTLPKFLYALGIREVGEATALNLAQHF 532
           FRLR  AGEL   E    KS  N++ A+   +     K L+ LGIR VG  TA +L + +
Sbjct: 487 FRLRTHAGELLGREGWKEKSVDNLLAAIEAKRAPDAAKLLFGLGIRHVGAVTARDLLKRY 546

Query: 533 LSLEAI--------------------QQASLEQFIEVPDVGVVVASHLQAFFAQDRNQQV 572
            +L A+                    +  ++ + I V +VG  V   L  FF +  N + 
Sbjct: 547 TTLPALRTLADEIIALRDQAYETQAKKDKAIAEHIGVENVGAAVGHALADFFHEPHNVEA 606

Query: 573 INELLEQGITWPALTAAPVAVDSALAGKIVVLTGSFTQLSRNDAKAALQALGAKVTGSVS 632
            ++LL + ++ P       A  SA+ GKIVV TG    +SR++AKA  + LGAK  GSVS
Sbjct: 607 WDDLLSE-VSPPDYVVETTA--SAVTGKIVVFTGKLETMSRDEAKAQAERLGAKAAGSVS 663

Query: 633 KNTDMVFAGEAAGSKLAKATELGIQVFDEQ 662
             TD+V AG  AGSKL +AT LGI+V  EQ
Sbjct: 664 AKTDLVVAGPGAGSKLKQATALGIEVISEQ 693