Pairwise Alignments

Query, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., DNA ligase (EC 6.5.1.2), LigB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  115 bits (287), Expect = 7e-30
 Identities = 111/453 (24%), Positives = 199/453 (43%), Gaps = 50/453 (11%)

Query: 5   AQRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLRVGG 64
           A+ +  L++ L +    Y+ +   ++ D+ YD+L   L++ +    + +SS   S  + G
Sbjct: 31  AEEIARLQQQLADWNDIYWKQGVSAVDDSVYDQLSARLVQWQRCVGQDVSSTPVSPPLNG 90

Query: 65  RPLDAFESVVHEIPMLSLDNAFDDGELESFYRRMTDRIPAVQHSAFCCEPKLDGLAVSLL 124
                  + +H +    +    D   +E + R           S    +PK+DG+AV+L+
Sbjct: 91  -------TTMHPVAHTGVRKLVDRQAVEQWMRG---------RSELWVQPKVDGVAVTLV 134

Query: 125 YENGVLTRAATRGDGTTGENITENVRTIKSIPLRLQGADFPTRLEVRGEVFMPKAGFEAL 184
           Y+NG LTRA +RG+G  GE+ T  +R I SIP   QGA       ++GE+F+ + G    
Sbjct: 135 YQNGKLTRAISRGNGLQGEDWTPKIRLIPSIPQTTQGA--LANAVLQGEIFLQREGHIQQ 192

Query: 185 NARALKKGEKQFVNPRNAAAGSLRQLDSKITAQRPLAFYAYSVGVIEGGELATSHYQRFL 244
               +        N R+  AG L + D+  +A   L  + ++       +   +  +R  
Sbjct: 193 RMGGM--------NARSKVAGMLMRQDN-ASALNSLGIFIWA-----WPDGPANMPERLS 238

Query: 245 QLKGWGLPICPE-TKLVTSLAEVKAFYQDILQRRQSLAYEIDGVVIKVDDIQLQERLGFV 303
           QL   G  +  + T  V   +EV+   Q  L    +L +  DGVVI++      +   + 
Sbjct: 239 QLAKAGFSLTNKYTLAVKDASEVERARQSWL--TSALPFVTDGVVIRMAKEPASQH--WR 294

Query: 304 ARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVGGVTVSNATLHNADE 363
                W  A+K+P   ++  ++ ++F VG++G IT VA L PV +    V    + +   
Sbjct: 295 PGQGDWLAAWKYPPVAQVAQVSAIQFSVGKSGKITVVASLVPVILDDKRVQRVNIGSVKR 354

Query: 364 IERLGVMVGDTVVIRRAGDVIPQIVSVVLERRPENAKSIVFPTRCPVCQSDVERVEGEAV 423
            E   +  GD +++  AG  IP++  VV   R E +K +   +               ++
Sbjct: 355 WEAWDIAPGDQILVSLAGQGIPRLDEVVWRSR-ERSKPVPPDSHF------------NSL 401

Query: 424 ARCSGGLICQAQRKEALKHFVSRKAMDVEGLGD 456
                   CQ Q    L    SR A+ ++G+G+
Sbjct: 402 TCFYASATCQEQFISRLIWLGSRSALGLDGMGE 434