Pairwise Alignments

Query, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

Subject, 671 a.a., DNA ligase (EC 6.5.1.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  865 bits (2234), Expect = 0.0
 Identities = 437/669 (65%), Positives = 528/669 (78%), Gaps = 1/669 (0%)

Query: 1   MSDVAQRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSL 60
           M  + Q+LTELR TL  H   Y+V DAP IPDAEYDRLMREL ELEA  P+L++ DSP+ 
Sbjct: 1   MEPIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQ 60

Query: 61  RVGGRPLDAFESVVHEIPMLSLDNAFDDGELESFYRRMTDRIPAVQHSAFCCEPKLDGLA 120
           RVG  PL AF  + HE+PMLSLDN FD+    +F +R+ DR+ + ++  +CCE KLDGLA
Sbjct: 61  RVGAAPLTAFNQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKSTENVIWCCELKLDGLA 120

Query: 121 VSLLYENGVLTRAATRGDGTTGENITENVRTIKSIPLRLQGADFPTRLEVRGEVFMPKAG 180
           VS+LYENGVL  AATRGDGTTGE+IT NVRTI++IPL+L G + P RLEVRGEVF+P+AG
Sbjct: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGDNIPARLEVRGEVFLPQAG 180

Query: 181 FEALNARALKKGEKQFVNPRNAAAGSLRQLDSKITAQRPLAFYAYSVGVIEGGELATSHY 240
           FE +N  A + G K F NPRNAAAGSLRQLD +ITA+RPL F+ Y VG++EGGEL  +H 
Sbjct: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGILEGGELPDTHL 240

Query: 241 QRFLQLKGWGLPICPETKLVTSLAEVKAFYQDILQRRQSLAYEIDGVVIKVDDIQLQERL 300
            R LQ K WGLP+     L  S   V  FY ++ + R +L ++IDGVVIKV+ + LQE L
Sbjct: 241 GRLLQFKAWGLPVSDRVTLCDSPQAVLDFYHNVEKDRPTLGFDIDGVVIKVNSLALQELL 300

Query: 301 GFVARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVGGVTVSNATLHN 360
           GFVARAPRWA+A+KFPAQE++T + DVEFQVGRTGAITPVA+LEPV V GV VSNATLHN
Sbjct: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVQVAGVLVSNATLHN 360

Query: 361 ADEIERLGVMVGDTVVIRRAGDVIPQIVSVVLERRPENAKSIVFPTRCPVCQSDVERVEG 420
           ADEIERLG+ +GD VVIRRAGDVIPQ+V+VVL  RPE  + IVFPT CPVC SDVERVEG
Sbjct: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEETRPIVFPTHCPVCGSDVERVEG 420

Query: 421 EAVARCSGGLICQAQRKEALKHFVSRKAMDVEGLGDKVIEQLVDREMVSTPADLFRLRAG 480
           EAV RC+GGLIC AQRKE+LKHFVSR+AMDV+G+GDK+I+QLV+RE V TPADLFRL AG
Sbjct: 421 EAVTRCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEREYVHTPADLFRLTAG 480

Query: 481 ELTILERMGPKSAQNVIDALNKAKQTTLPKFLYALGIREVGEATALNLAQHFLSLEAIQQ 540
           +LT L+RMGPKSAQNV++AL K+K TT  +FLYALGIREVGEATA  LA +F +LEA+Q 
Sbjct: 481 KLTGLDRMGPKSAQNVVNALEKSKTTTFARFLYALGIREVGEATAAGLAAYFGTLEALQA 540

Query: 541 ASLEQFIEVPDVGVVVASHLQAFFAQDRNQQVINELLEQGITWPALTAAPV-AVDSALAG 599
           A++++  +VPDVG+VVA+H+  FFA++ N+ VI +LL +G+ WPA     V  +DS  AG
Sbjct: 541 ATIDELQKVPDVGIVVATHVFNFFAEESNRDVIGQLLAEGVHWPAPVVINVQEIDSPFAG 600

Query: 600 KIVVLTGSFTQLSRNDAKAALQALGAKVTGSVSKNTDMVFAGEAAGSKLAKATELGIQVF 659
           K VVLTGS +Q+SR+DAKA L ALGAKV GSVSK TD+V AGEAAGSKLAKA ELGI V 
Sbjct: 601 KTVVLTGSLSQMSRDDAKARLVALGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGITVI 660

Query: 660 DEQALIEFL 668
           DE  +I  L
Sbjct: 661 DEAEMIRLL 669