Pairwise Alignments

Query, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., putative enzyme (VIMSS) from Escherichia coli BW25113

 Score = 94.4 bits (233), Expect = 1e-23
 Identities = 91/397 (22%), Positives = 168/397 (42%), Gaps = 58/397 (14%)

Query: 6   QRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLRVGGR 65
           + ++ L++ + +    Y+ E    + D  YD+L   L + +                G  
Sbjct: 32  EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF-------------GSE 78

Query: 66  PLDAFE-----SVVHEIPMLSLDNAFDDGELESFYRRMTDRIPAVQHSAFCCEPKLDGLA 120
           P D        +V+H +    +    D   L  + R  +D            +PK+DG+A
Sbjct: 79  PRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD---------LWVQPKVDGVA 129

Query: 121 VSLLYENGVLTRAATRGDGTTGENITENVRTIKSIPLRLQGADFPTRLEVRGEVFMPKAG 180
           V+L+Y +G L +A +RG+G  GE+ T+ V  I ++P  + G    + L+  GE+F+ + G
Sbjct: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFLQREG 187

Query: 181 -----FEALNARALKKGEKQFVNPRNAAAGSLRQLDSKITAQRPLAFYAYSVGVIEGGEL 235
                   +NARA              A   +RQ DS       +  +A+     +G +L
Sbjct: 188 HIQQQMGGINARA------------KVAGLMMRQDDSDTLNSLGVFVWAWP----DGPQL 231

Query: 236 ATSHYQRFLQLKGWGLPICPE-TKLVTSLAEVKAFYQDILQRRQSLAYEIDGVVIKVDDI 294
            +    R  +L   G  +    T+ V +  EV     +    +  L +  DGVV++    
Sbjct: 232 MS---DRLKELATAGFTLTQTYTRAVKNADEVARVRNE--WWKAELPFVTDGVVVRA--A 284

Query: 295 QLQERLGFVARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVGGVTVS 354
           +  E   ++     W +A+K+    ++  +  ++F VG++G I+ VA L PV +    V 
Sbjct: 285 KEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344

Query: 355 NATLHNADEIERLGVMVGDTVVIRRAGDVIPQIVSVV 391
              + +    +   +  GD +++  AG  IP+I  VV
Sbjct: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVV 381