Pairwise Alignments

Query, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

Subject, 672 a.a., NAD-dependent DNA ligase LigA from Erwinia tracheiphila SCR3

 Score =  841 bits (2172), Expect = 0.0
 Identities = 428/670 (63%), Positives = 522/670 (77%), Gaps = 2/670 (0%)

Query: 1   MSDVAQRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSL 60
           M  V  ++T L+ TL  +  +Y+V DAP++PDAEYDRLM EL +LE A+P+L++ DSP+ 
Sbjct: 1   MESVQDKITALQTTLRHYEYQYHVLDAPAVPDAEYDRLMAELRQLEEANPQLIAPDSPTQ 60

Query: 61  RVGGRPLDAFESVVHEIPMLSLDNAFDDGELESFYRRMTDRIPAVQHSAFCCEPKLDGLA 120
           RVG  PL  FE V H++PMLSLDNAFD+    +F RR+ +R+       FCCE KLDGLA
Sbjct: 61  RVGAAPLSVFEQVTHDVPMLSLDNAFDETSYLAFNRRLQERLKRTDEITFCCELKLDGLA 120

Query: 121 VSLLYENGVLTRAATRGDGTTGENITENVRTIKSIPLRLQGADFPTRLEVRGEVFMPKAG 180
           VSLLYENG+L RAATRGDGTTGENIT NVRTI+++PLRL G + PTR+EVRGEVFMP+AG
Sbjct: 121 VSLLYENGLLIRAATRGDGTTGENITANVRTIRAVPLRLVGENVPTRIEVRGEVFMPQAG 180

Query: 181 FEALNARALKKGEKQFVNPRNAAAGSLRQLDSKITAQRPLAFYAYSVGVIEGGELATSHY 240
           FE LN  A K G K F NPRNAAAGSLRQLD +ITA+RPLAF  Y VG++E GEL  SH+
Sbjct: 181 FEVLNDEARKTGNKVFANPRNAAAGSLRQLDPRITARRPLAFLCYGVGLVEEGELPHSHW 240

Query: 241 QRFLQLKGWGLPICPETKLVTSLAEVKAFYQDILQRRQSLAYEIDGVVIKVDDIQLQERL 300
            R  QLK WGLP+    +L  S AEV A+Y ++ Q R +L ++IDGVVIKVD   LQ++L
Sbjct: 241 DRLQQLKMWGLPVSNRIQLCNSPAEVLAYYHNVKQERATLGFDIDGVVIKVDSQDLQKQL 300

Query: 301 GFVARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVGGVTVSNATLHN 360
           GFVARAPRWA+A+KFPAQE++T + DVEFQVGRTGAITPVA+LEPV V GV VSNATLHN
Sbjct: 301 GFVARAPRWAVAFKFPAQEQITTVRDVEFQVGRTGAITPVARLEPVQVAGVIVSNATLHN 360

Query: 361 ADEIERLGVMVGDTVVIRRAGDVIPQIVSVVLERRPENAKSIVFPTRCPVCQSDVERVEG 420
           ADEI RLG+ +GD V++RRAGDVIPQ+V V+   R  +AK +VFP+ CPVC SD+ERVEG
Sbjct: 361 ADEINRLGLRIGDRVIVRRAGDVIPQVVGVMESERSLDAKEVVFPSHCPVCGSDIERVEG 420

Query: 421 EAVARCSGGLICQAQRKEALKHFVSRKAMDVEGLGDKVIEQLVDREMVSTPADLFRLRAG 480
           E VARC+GGLIC AQRK ALKHFVSR+AMDV+GLGDK+I+QLV++E V TPADLF L  G
Sbjct: 421 EVVARCTGGLICGAQRKGALKHFVSRRAMDVDGLGDKIIDQLVEKEYVKTPADLFFLSTG 480

Query: 481 ELTILERMGPKSAQNVIDALNKAKQTTLPKFLYALGIREVGEATALNLAQHFLSLEAIQQ 540
           +LT L+RMG KSAQNV++AL KAK+TTL +FLYALGI EVGEATA NLA HF SLE I  
Sbjct: 481 KLTGLDRMGVKSAQNVVNALEKAKKTTLARFLYALGISEVGEATAANLAAHFGSLEKIID 540

Query: 541 ASLEQFIEVPDVGVVVASHLQAFFAQDRNQQVINELLEQ-GITWPALTAAPV-AVDSALA 598
           A ++  I V DVG VVA+H++ F  ++ N++VI +L E+ G++WPA+T      +DS  A
Sbjct: 541 ADIDSLIAVQDVGAVVAAHVRNFMGEESNREVIRQLTEEAGVSWPAVTVVNAEEIDSPFA 600

Query: 599 GKIVVLTGSFTQLSRNDAKAALQALGAKVTGSVSKNTDMVFAGEAAGSKLAKATELGIQV 658
           GK VVLTGS + LSR++AK  L ALGAKV+GSVSK T++V AGEAAGSKLAKA ELGI V
Sbjct: 601 GKTVVLTGSLSVLSRDEAKDRLTALGAKVSGSVSKKTNLVIAGEAAGSKLAKAQELGIDV 660

Query: 659 FDEQALIEFL 668
            DE  +I  L
Sbjct: 661 IDEAEMIRLL 670