Pairwise Alignments

Query, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., NAD-dependent DNA ligase (contains BRCT domain type II) from Enterobacter asburiae PDN3

 Score =  115 bits (289), Expect = 4e-30
 Identities = 114/444 (25%), Positives = 181/444 (40%), Gaps = 67/444 (15%)

Query: 22  YYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLRVGGRPLDAFESVVHEIPMLS 81
           Y+ +    I D  YD+L   L + +       S D      G        SV H +    
Sbjct: 46  YWKQGVSEINDEVYDQLHGRLTQWQRCFGSETSEDKLPTLTG--------SVKHPVAHTG 97

Query: 82  LDNAFDDGELESFYRRMTDRIPAVQHSAFCCEPKLDGLAVSLLYENGVLTRAATRGDGTT 141
           +       EL  + R         QH     +PK+DG+AV+L+Y NG LT+A +RGDG T
Sbjct: 98  VHKVASKEELRQWMR-------VRQH--LWLQPKVDGVAVTLVYRNGKLTQAISRGDGLT 148

Query: 142 GENITENVRTIKSIPLRLQGADFPTRLEVRGEVFMPKAG-----FEALNARALKKGEKQF 196
           GE+ T  VR I S+P +L GA   + L+  GE+F  +          +NARA        
Sbjct: 149 GEDWTGKVRLIPSVPQKLTGALANSVLQ--GELFWLRDNHIQNQMGGMNARA-------- 198

Query: 197 VNPRNAAAGSLRQLDSKITAQRPLAFYAYSVGVIEGGELATSHYQRFLQLKGWGLPICPE 256
                 A   +RQ D+ + ++  +  +A+  G     ++ TS      +L   G P+   
Sbjct: 199 ----KVAGAMMRQKDNALLSKIGVFIWAWPDG---PKDMRTS----LAELSQAGFPLSAR 247

Query: 257 TKLVTSLAEVKAFYQDILQRRQSLAYEIDGVVIKVDDIQLQERLGFVARAPRWAIAYKFP 316
             L     +     Q       +L +  DG+V++ +D    E   ++     W +A+K+P
Sbjct: 248 YTLPADSVDA-VEKQRAAWHVTALPFATDGIVVRSEDEPAGEE--WLPGEGSWVVAWKYP 304

Query: 317 AQEELTLLNDVEFQVGRTGAITPVAKLEPVFVGGVTVSNATLHNADEIERLGVMVGDTVV 376
              ++  + D+ F VGRTG I+ VA LEPV +    V   +L +    + + +  GD + 
Sbjct: 305 PSAQVAEVRDIHFSVGRTGKISVVAALEPVQLDDKQVQRVSLGSVGRWQNMDIAPGDQIQ 364

Query: 377 IRRAGDVIPQIVSVVL----ERRPENAKSIVFPTRCPVCQSDVERVEGEAVARCSGGLIC 432
           I  AG  IP+   V+       +PE          C     +                 C
Sbjct: 365 ISLAGQGIPRFDKVLWRGTDRHKPEPPAPRYHALSCFYASPE-----------------C 407

Query: 433 QAQRKEALKHFVSRKAMDVEGLGD 456
             Q    L    S++  D+EGLG+
Sbjct: 408 MEQFFARLTWLSSKQVFDIEGLGE 431