Pairwise Alignments

Query, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., NAD-dependent DNA ligase LigB from Escherichia coli ECRC98

 Score = 95.1 bits (235), Expect = 8e-24
 Identities = 106/460 (23%), Positives = 191/460 (41%), Gaps = 67/460 (14%)

Query: 6   QRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLRVGGR 65
           + +  L++ + +    Y+ E    + D  YD+L   L + +          S    V   
Sbjct: 32  EEIFRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCFV------SEPRDVMMP 85

Query: 66  PLDAFESVVHEIPMLSLDNAFDDGELESFYRRMTDRIPAVQHSAFCCEPKLDGLAVSLLY 125
           PL+   +V+H +    +    D   L  + R  +D            +PK+DG+AV+L+Y
Sbjct: 86  PLNG--AVMHPVAHTGVRKMADKNALSLWMRERSD---------LWVQPKVDGVAVTLVY 134

Query: 126 ENGVLTRAATRGDGTTGENITENVRTIKSIPLRLQGADFPTRLEVRGEVFMPKAG----- 180
            +G L +A +RG+G  GE+ T+ V  I ++P  + G    + L+  GE+F+ + G     
Sbjct: 135 RDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFLQREGHIQQQ 192

Query: 181 FEALNARALKKGEKQFVNPRNAAAGSLRQLDSKITAQRPLAFYAYSVGVIEGGELATSHY 240
              +NARA              A   +RQ DS       +  +A+     +G +L T   
Sbjct: 193 MGGINARA------------KVAGLMMRQDDSDTLNSLGVFVWAWP----DGPQLMT--- 233

Query: 241 QRFLQLKGWGLPICPE-TKLVTSLAEVKAFYQDILQRRQSLAYEIDGVVIKVDDIQLQER 299
            R  +L   G  +    T+ V +  EV     +  + +  L +  DGVV++    +  E 
Sbjct: 234 DRLKELATAGFTLTQRYTRAVKNADEVARVRNEWWKAK--LPFVTDGVVVR--GAKEPES 289

Query: 300 LGFVARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVGGVTVSNATLH 359
             ++     W +A+K+    ++  +  ++F VG++G I+ VA L PV +    V    + 
Sbjct: 290 RHWLPGQAEWLVAWKYQPVAQVAKVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIG 349

Query: 360 NADEIERLGVMVGDTVVIRRAGDVIPQIVSVV---LERRPENAKSIVFPTRCPVCQSDVE 416
           +    +   +  GD +++  AG  IP+I  VV    ER         F +      SDV 
Sbjct: 350 SVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYFASDV- 408

Query: 417 RVEGEAVARCSGGLICQAQRKEALKHFVSRKAMDVEGLGD 456
                          CQ Q    L    S++ + ++G+G+
Sbjct: 409 ---------------CQEQFISRLVWLGSKQVLGLDGIGE 433