Pairwise Alignments

Query, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., NAD-dependent DNA ligase LigB from Escherichia coli ECRC62

 Score = 96.7 bits (239), Expect = 3e-24
 Identities = 105/465 (22%), Positives = 190/465 (40%), Gaps = 77/465 (16%)

Query: 6   QRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLRVGGR 65
           + ++ L++ + +    Y+ E    + D  YD+L   L + +                G  
Sbjct: 32  EEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF-------------GSE 78

Query: 66  PLDAFE-----SVVHEIPMLSLDNAFDDGELESFYRRMTDRIPAVQHSAFCCEPKLDGLA 120
           P D        +V+H +    +    D   L  + R  +D            +PK+DG+A
Sbjct: 79  PRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSD---------LWVQPKVDGVA 129

Query: 121 VSLLYENGVLTRAATRGDGTTGENITENVRTIKSIPLRLQGADFPTRLEVRGEVFMPKAG 180
           V+L+Y +G L +A +RG+G  GE+ T+ V  I ++P  + G    + L+  GE+F+ + G
Sbjct: 130 VTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQ--GEIFLQREG 187

Query: 181 -----FEALNARALKKGEKQFVNPRNAAAGSLRQLDSKITAQRPLAFYAYSVGVIEGGEL 235
                   +NARA              A   +RQ DS       +  +A+     +G +L
Sbjct: 188 HIQQQMGGINARA------------KVAGLMMRQDDSDTLNSLGVFVWAWP----DGPQL 231

Query: 236 ATSHYQRFLQLKGWGLPICPE-TKLVTSLAEVKAFYQDILQRRQSLAYEIDGVVIKVDDI 294
            T    R  +L   G  +    T+ V +  EV     +  + +  L +  DGVV++    
Sbjct: 232 MT---DRLKELATAGFTLTQRYTRAVKNADEVARVRNEWWKAK--LPFVTDGVVVR--GA 284

Query: 295 QLQERLGFVARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVGGVTVS 354
           +  E   ++     W +A+K+    ++  +  ++F VG++G I+ VA L PV +    V 
Sbjct: 285 KEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQ 344

Query: 355 NATLHNADEIERLGVMVGDTVVIRRAGDVIPQIVSVV---LERRPENAKSIVFPTRCPVC 411
              + +    +   +  GD +++  AG  IP+I  VV    ER         F +     
Sbjct: 345 RVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYF 404

Query: 412 QSDVERVEGEAVARCSGGLICQAQRKEALKHFVSRKAMDVEGLGD 456
            SDV                CQ Q    L    S++ + ++G+G+
Sbjct: 405 ASDV----------------CQEQFISRLVWLGSKQVLGLDGIGE 433