Pairwise Alignments

Query, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., NAD-dependent DNA ligase LigB from Dickeya dianthicola ME23

 Score =  136 bits (342), Expect = 3e-36
 Identities = 146/585 (24%), Positives = 251/585 (42%), Gaps = 68/585 (11%)

Query: 6   QRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLRVGGR 65
           Q + +L + L +    YY +    + D  YD+L + L   +      +   +  L   G+
Sbjct: 33  QEIAQLGQQLTQWDHAYYEQGQSPVDDQVYDQLRQTLATWQVCFQADVGRFAIGLPTTGK 92

Query: 66  PLDAFESVVHEIPMLSLDNAFDDGELESFYRRMTDRIPAVQHSAFCCEPKLDGLAVSLLY 125
            L       H +    L    +  EL+ +           QH     +PK+DG+AV+L+Y
Sbjct: 93  RL-------HPVAHTGLKKLSEPAELKQWI---------AQHHELWVQPKIDGVAVTLVY 136

Query: 126 ENGVLTRAATRGDGTTGENITENVRTIKSIPLRLQGADFPTRLEVRGEVFMPKAGFE--- 182
           E G L  A +RG+G  GE+ T+ VR + S+  +L G     R   +GE+++   G     
Sbjct: 137 EQGHLVAAISRGNGRQGEDWTDKVRQMNSVAQQLSGVS--GRQVFQGELYLQVEGHRQQQ 194

Query: 183 --ALNARALKKGEKQFVNPRNAAAGSLRQLDSKITAQRPLAFYAYSVGVIEGGELATSHY 240
              +NARA   GE +            R+  S + ++  +  +A+  G     ++ T   
Sbjct: 195 VGGINARAQVAGEMR------------RKQPSPLLSRIGVFIWAWPDGP---ADMPT--- 236

Query: 241 QRFLQLKGWGLPICPE-TKLVTSLAEVKAFYQDILQRRQSLAYEIDGVVIKVDDIQLQER 299
            R  +L+  G  +  + T+ V+SL  V  + +     R  L +  DGVV++    Q +E 
Sbjct: 237 -RLAKLRELGFGLTADYTQPVSSLEAVAQWRERWY--RAPLPFVTDGVVVR----QAREP 289

Query: 300 LG--FVARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVGGVTVSNAT 357
            G  +      WA+A+K+P    +T + DV+ +VGRTG +T V +L+PV +   TVS   
Sbjct: 290 AGRYWQDTPAEWAVAWKYPLVNRVTEVTDVDVEVGRTGRMTVVLQLQPVILDDKTVSRVN 349

Query: 358 LHNADEIERLGVMVGDTVVIRRAGDVIPQIVSVVLERRPENAKSIVFPTRCPVCQSDVER 417
           L +     +  V+ GD V +  AG  IP++ +VV   R    ++I  P+           
Sbjct: 350 LGSVSRWRQWDVLPGDRVSVSLAGLGIPRLDAVVW--RGAVREAITVPSTSSF------- 400

Query: 418 VEGEAVARCSGGLICQAQRKEALKHFVSRKAMDVEGLGDKVIEQLVDREMVSTPADLFRL 477
              +  +       CQ Q    L     R  + + G+ +    +L  R  +        L
Sbjct: 401 ---DVFSCLQWSRECQPQFLARLVWMSGRNGLSLSGISEATWRRLTLRGTLVDVVSWLAL 457

Query: 478 RAGELTILERMGPKSAQNVIDALNKAKQTTLPKFLYALGIREVGEAT-ALNLAQHFLSLE 536
              +L      G + A+ +   L +A++  L  +L ALG+     A  AL+ A    SLE
Sbjct: 458 EPAQLAAAGDFGEQQAERIHLQLQRARRQPLRNWLLALGLPVPSRARHALDGA----SLE 513

Query: 537 AIQQASLEQFIEVPDVGVVVASHLQAFFAQDRNQQVINELLEQGI 581
            +QQ S  ++ +   +GV  A  ++ F       + +  L EQG+
Sbjct: 514 QLQQRSAAEWQQFSGIGVRRAQRIRDFLHHPDIARQLAWLNEQGV 558