Pairwise Alignments

Query, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

Subject, 820 a.a., DNA ligase, NAD-dependent from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  394 bits (1013), Expect = e-114
 Identities = 224/547 (40%), Positives = 320/547 (58%), Gaps = 14/547 (2%)

Query: 3   DVAQRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSLRV 62
           +  +R+ EL  T++ H   YY +D   I D E+D+L+ EL+ LE   PE    +SP+  V
Sbjct: 8   EAQKRIAELTATINHHNQLYYQKDQSEISDFEFDKLLEELMLLEEQFPEFQDKNSPTQHV 67

Query: 63  GGRPLDAFESVVHEIPMLSLDNAFDDGELESFYRRMTDRIPAVQHSAFCCEPKLDGLAVS 122
           GG     FE+V HE  MLSL N +   EL +F  R+   +   Q+S +CCE K DG+A+S
Sbjct: 68  GGTITKEFETVEHETRMLSLGNTYSKEELIAFDERVAKGLGHRQYS-YCCELKFDGVAIS 126

Query: 123 LLYENGVLTRAATRGDGTTGENITENVRTIKSIPLRLQGADFPTRLEVRGEVFMPKAGFE 182
           L+YE G L RA TRGDG  G+N+T NV+TIK+IPL LQG D P + E+RGE+F+P   FE
Sbjct: 127 LVYEKGELVRAVTRGDGYRGDNVTANVKTIKNIPLYLQGDDVPDKFEIRGEIFLPVKEFE 186

Query: 183 ALNARALKKGEKQFVNPRNAAAGSLRQLDSKITAQRPLAFYAYSVGVIEGGELATS-HYQ 241
            +N      GE    NPRN A+G+L+  DS I A+R L  Y Y    + G ++    H Q
Sbjct: 187 KINTEREANGEALLANPRNTASGTLKMQDSSIVAKRRLNCYFYQ---LLGDQIGVDQHDQ 243

Query: 242 RFLQLKGWGLPICPETKLVTSLAEVKAFYQDILQRRQSLAYEIDGVVIKVDDIQLQERLG 301
              +L+ WG  I P  K  T +  V  + +   ++R SL  E DGVV+KV+D   +E LG
Sbjct: 244 AMDRLEKWGFNISPTYKKCTDINAVFEYIESWREKRHSLPLETDGVVLKVNDYAQREELG 303

Query: 302 FVARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVGGVTVSNATLHNA 361
           F A+ PRWAIAYK+ A+   + L  V +QVGRTGAITPVA L PV + G TV  A+LHNA
Sbjct: 304 FTAKIPRWAIAYKYKAESAESTLMSVTYQVGRTGAITPVANLSPVLLAGTTVKRASLHNA 363

Query: 362 DEIERLGVMVGDTVVIRRAGDVIPQIVSVVLERRPENAKSIVFPTRCPVCQSDVERVEGE 421
           +EI RL +  GD V + + G++IP+I +V +E+R  +AK I + T CP C + +ER EGE
Sbjct: 364 NEIMRLDLHHGDVVFVEKGGEIIPKITAVAVEKRKADAKPIAYITHCPECGTPLERKEGE 423

Query: 422 AVARCSGGLICQAQRKEALKHFVSRKAMDVEGLGDKVIEQLVDREMVSTPADLFRLRAGE 481
           A   C     C  Q    ++HFV ++AMD++ +G + I  L+++  +  PADL+ L A +
Sbjct: 424 AKHFCPNTASCPPQVLGRIEHFVHKRAMDIDSMGTERIRALINQGYIEHPADLYELEAKK 483

Query: 482 LTILERMGPKSAQNVIDALNKAKQTTLPKFLYALGIREVGEATALNLAQHFLS-LEAIQQ 540
             +L      +A+    + +     TL K L+A     + +  +L+    +LS  EA++Q
Sbjct: 484 DQLLGL--EINAEQYEKSSDGYLYVTLRKALFA-----ITDGISLSAIDRYLSDTEALEQ 536

Query: 541 -ASLEQF 546
              L QF
Sbjct: 537 HQKLAQF 543



 Score =  101 bits (252), Expect = 1e-25
 Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 2/176 (1%)

Query: 495 NVIDALNKAKQTTLPKFLYALGIREVGEATALNLAQHFLSLEAIQQASLEQFIEVPDVGV 554
           N++  +  +K     K L+ALGIR +GE TA  LA+HF ++E + QAS EQ +++  VG 
Sbjct: 643 NMLAGIQASKNQPFEKVLFALGIRNIGENTAQLLARHFKTIENLTQASTEQLLDINGVGE 702

Query: 555 VVASHLQAFFAQDRNQQVINELLEQGITWPALTA-APVAVDSALAGKIVVLTGSFTQLSR 613
            +   ++ FF+Q+ N+Q I  L   G+ +       P    +AL G  V+ +G F    R
Sbjct: 703 TLVGSIREFFSQEENKQNIQRLKAHGLHFEIKAEDLPEQKGNALEGLKVLASGKFEHFKR 762

Query: 614 NDAKAALQALGAKVTGSVSKNTDMVFAGEAAG-SKLAKATELGIQVFDEQALIEFL 668
           ++   A+ A G     SVSKN D++  G   G SK  KA +LGI++  E   +  +
Sbjct: 763 DEIIEAISAHGGTYLKSVSKNLDLIIEGADMGPSKKEKAQKLGIKMISENEFLSMI 818