Pairwise Alignments

Query, 669 a.a., DNA ligase (NAD(+)) LigA from Vibrio cholerae E7946 ATCC 55056

Subject, 671 a.a., DNA ligase, NAD(+)-dependent from Escherichia coli BL21

 Score =  876 bits (2264), Expect = 0.0
 Identities = 440/669 (65%), Positives = 532/669 (79%), Gaps = 1/669 (0%)

Query: 1   MSDVAQRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHPELMSSDSPSL 60
           M  + Q+LTELR TL  H   Y+V DAP IPDAEYDRLMREL ELE  HPEL++ DSP+ 
Sbjct: 1   MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQ 60

Query: 61  RVGGRPLDAFESVVHEIPMLSLDNAFDDGELESFYRRMTDRIPAVQHSAFCCEPKLDGLA 120
           RVG  PL AF  + HE+PMLSLDN FD+    +F +R+ DR+ + +   +CCE KLDGLA
Sbjct: 61  RVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLKSNEKVTWCCELKLDGLA 120

Query: 121 VSLLYENGVLTRAATRGDGTTGENITENVRTIKSIPLRLQGADFPTRLEVRGEVFMPKAG 180
           VS+LYENGVL  AATRGDGTTGE+IT NVRTI++IPL+L G + P RLEVRGEVF+P+AG
Sbjct: 121 VSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGENIPARLEVRGEVFLPQAG 180

Query: 181 FEALNARALKKGEKQFVNPRNAAAGSLRQLDSKITAQRPLAFYAYSVGVIEGGELATSHY 240
           FE +N  A + G K F NPRNAAAGSLRQLD +ITA+RPL F+ Y VGV+EGGEL  +H 
Sbjct: 181 FEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPDTHL 240

Query: 241 QRFLQLKGWGLPICPETKLVTSLAEVKAFYQDILQRRQSLAYEIDGVVIKVDDIQLQERL 300
            R LQ K WGLP+     L  S  EV AFY  + + R +L ++IDGVVIKV+ +  QE+L
Sbjct: 241 GRLLQFKQWGLPVSDRVTLCESAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQL 300

Query: 301 GFVARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVGGVTVSNATLHN 360
           GFVARAPRWA+A+KFPAQE++T + DVEFQVGRTGAITPVA+LEPV V GV VSNATLHN
Sbjct: 301 GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN 360

Query: 361 ADEIERLGVMVGDTVVIRRAGDVIPQIVSVVLERRPENAKSIVFPTRCPVCQSDVERVEG 420
           ADEIERLG+ +GD VVIRRAGDVIPQ+V+VVL  RPE+ + +VFPT CPVC SDVERVEG
Sbjct: 361 ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEDTREVVFPTHCPVCGSDVERVEG 420

Query: 421 EAVARCSGGLICQAQRKEALKHFVSRKAMDVEGLGDKVIEQLVDREMVSTPADLFRLRAG 480
           EAVARC+GGLIC AQRKE+LKHFVSR+AMDV+G+GDK+I+QLV++E V TPADLF+L AG
Sbjct: 421 EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG 480

Query: 481 ELTILERMGPKSAQNVIDALNKAKQTTLPKFLYALGIREVGEATALNLAQHFLSLEAIQQ 540
           +LT LERMGPKSAQNV++AL KAK+TT  +FLYALGIREVGEATA  LA +F +LEA++ 
Sbjct: 481 KLTGLERMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEA 540

Query: 541 ASLEQFIEVPDVGVVVASHLQAFFAQDRNQQVINELLEQGITWPA-LTAAPVAVDSALAG 599
           AS+E+  +VPDVG+VVASH+  FFA++ N+ VI+ELL +G+ WPA +      +DS  AG
Sbjct: 541 ASIEELQKVPDVGIVVASHVHNFFAEESNRNVISELLAEGVHWPAPIVINAEEIDSPFAG 600

Query: 600 KIVVLTGSFTQLSRNDAKAALQALGAKVTGSVSKNTDMVFAGEAAGSKLAKATELGIQVF 659
           K VVLTGS +Q+SR+DAKA L  LGAKV GSVSK TD+V AGEAAGSKLAKA ELGI+V 
Sbjct: 601 KTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI 660

Query: 660 DEQALIEFL 668
           DE  ++  L
Sbjct: 661 DEAEMLRLL 669