Pairwise Alignments

Query, 397 a.a., 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 407 a.a., putative oxidoreductase involved in anerobic synthesis of ubiquinone, FAD/NAD(P)-binding domain from Pseudomonas putida KT2440

 Score =  236 bits (602), Expect = 9e-67
 Identities = 146/394 (37%), Positives = 206/394 (52%), Gaps = 15/394 (3%)

Query: 17  DILVVGGGMVGAAAALGFARQGRKVAVIDSGAPHA--FEPSQPMDVRVSAISQTSVGLLE 74
           D+L+VG GMVG+A AL     G ++ ++D G      F+   P + RVSA+S  S  +LE
Sbjct: 6   DLLIVGAGMVGSALALALRHSGLQILLLDGGPLTVVPFDAQAPFEPRVSALSAASQRILE 65

Query: 75  ELGAWSSVVGMRACPYRHLETWEHPEC-RTRFSCESLGLPQLGYMVENRVIQLALWQQFA 133
            LGAW  +   RA PY  +  W+     +  FS  S+    LG++VENRV+Q  L ++  
Sbjct: 66  RLGAWDGIAQRRATPYSDMHVWDGSGTGQIHFSAASVHAQVLGHIVENRVVQDGLLERLH 125

Query: 134 AYPQLTLMCPEQLAQLNVSAEGCRVTLQSGAEIECDWVIGADGANSQVRNLVRIGVTAWD 193
               + L+   +L QL  S +   +TL  G ++    VI ADGANS VR L       WD
Sbjct: 126 D-SDIGLLANARLEQLRRSGDEWLLTLADGRQLRAPLVIAADGANSAVRRLAGCETREWD 184

Query: 194 YRQHCMLINVQTEQIQQETTWQQFFPTGPRSYLPL--GGNQ--ASLVWYDTPQRIRKLSG 249
           Y  H ++ +V+     Q T WQ+F   GP ++LPL   G Q   S+VW  TP+   +L  
Sbjct: 185 YLHHAIVTSVRCSAGHQATAWQRFTDEGPLAFLPLTRDGQQDWCSIVWSTTPEHAEQLMA 244

Query: 250 LNPEQLRSEILQYFPAELGNI-KVLQHGAFPLTRRHAQQYVKNRCILIGDAAHTINPLAG 308
           ++       + + F   LG + +       PL +RHA++YV    +LIGDAAHTI+PLAG
Sbjct: 245 MDEAAFLQALERAFEGRLGEVLQADPRVCVPLRQRHAKRYVDEGLVLIGDAAHTIHPLAG 304

Query: 309 QGVNLGFKDVAVL------LAQTQEQALNQASFERYERCRRPDNLLMQTGMDLFYKTFSN 362
           QGVNLGF D AVL        +  E+  +     RYER R P NL +   M+ F + F  
Sbjct: 305 QGVNLGFLDAAVLAEVLVNACERGERLADVKVLSRYERRRMPHNLALMAAMEGFERLFQA 364

Query: 363 SFTPVRFVRNVALALAERSGPLKTQVLRYALGFS 396
              P+R++RN  L L E+    K   +R ALG S
Sbjct: 365 DPLPLRWLRNSGLKLVEQMPEAKALFVRQALGLS 398