Pairwise Alignments

Query, 397 a.a., 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (NCBI) from Escherichia coli BW25113

 Score =  380 bits (977), Expect = e-110
 Identities = 204/390 (52%), Positives = 252/390 (64%), Gaps = 6/390 (1%)

Query: 11  MSGNKFDILVVGGGMVGAAAALGFARQGRKVAVIDSGAPHAFEPSQPMDVRVSAISQTSV 70
           M+    +I +VGGGMVG A ALG A+ G  V VI+   P  F      DVR+SAIS  SV
Sbjct: 1   MTNQPTEIAIVGGGMVGGALALGLAQHGFAVTVIEHAEPAPFVADSQPDVRISAISAASV 60

Query: 71  GLLEELGAWSSVVGMRACPYRHLETWEHPECRTRFSCESLGLPQLGYMVENRVIQLALWQ 130
            LL+ LG W +V  MR  PYR LETWE       F    L LP LGYMVEN V+Q ALWQ
Sbjct: 61  SLLKGLGVWDAVQAMRCHPYRRLETWEWETAHVVFDAAELKLPLLGYMVENTVLQQALWQ 120

Query: 131 QFAAYPQLTLMCPEQLAQLNVSAEGCRVTLQSGAEIECDWVIGADGANSQVRNLVRIGVT 190
              A+P++TL  P  L  L+   +   + L+ G  I    VIGADGANSQVR +  IGV 
Sbjct: 121 ALEAHPKVTLRVPGSLIALHRHDDLQELELKGGEVIRAKLVIGADGANSQVRQMAGIGVH 180

Query: 191 AWDYRQHCMLINVQTEQIQQETTWQQFFPTGPRSYLPLGGNQASLVWYDTPQRIRKLSGL 250
           AW Y Q CMLI+VQ E    ++TWQQF P GPR++LPL  N ASLVWYD+P RIR+L  +
Sbjct: 181 AWQYAQSCMLISVQCENDPGDSTWQQFTPDGPRAFLPLFDNWASLVWYDSPARIRQLQNM 240

Query: 251 NPEQLRSEILQYFPAELGNIKVLQHGAFPLTRRHAQQYVKNRCILIGDAAHTINPLAGQG 310
           N  QL++EI ++FP+ LG +  L  GAFPLTRRHA QYV+    L+GDAAHTI+PLAGQG
Sbjct: 241 NMAQLQAEIAKHFPSRLGYVTPLAAGAFPLTRRHALQYVQPGLALVGDAAHTIHPLAGQG 300

Query: 311 VNLGFKDVAVL---LAQTQEQALNQASF---ERYERCRRPDNLLMQTGMDLFYKTFSNSF 364
           VNLG++DV  L   L   +      AS+   +RY+  R  DN +MQ+GMDLFY  FSN+ 
Sbjct: 301 VNLGYRDVDALIDVLVNARSYGEAWASYPVLKRYQMRRMADNFIMQSGMDLFYAGFSNNL 360

Query: 365 TPVRFVRNVALALAERSGPLKTQVLRYALG 394
            P+RF+RN+ L  AER+G LK Q L+YALG
Sbjct: 361 PPLRFMRNLGLMAAERAGVLKRQALKYALG 390