Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3) from Variovorax sp. SCN45

 Score =  561 bits (1447), Expect = e-164
 Identities = 290/447 (64%), Positives = 336/447 (75%), Gaps = 3/447 (0%)

Query: 3   KKLLIKTWGCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQ 62
           KK+ IKT+GCQMNEYDS KMAD+LNAA GYE T+  +EAD++L NTCS+REKAQEKVF  
Sbjct: 2   KKVFIKTFGCQMNEYDSDKMADVLNAAQGYEPTQNVDEADLILFNTCSVREKAQEKVFSD 61

Query: 63  LGRWKTLKDKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQSQTSD 122
           LGR K LK K  GV IGVGGCVA+QEG +I  RAPYVD++FGPQTLHRLPEM+   +  D
Sbjct: 62  LGRVKHLKAK--GVKIGVGGCVASQEGQAIIARAPYVDIVFGPQTLHRLPEMLNDRERLD 119

Query: 123 APVMDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDDVL 182
            P +DISFPEIEKFD LP  R EG TAFVSIMEGCSKYC+YCVVPYTRGEEV+RP+DDVL
Sbjct: 120 RPQVDISFPEIEKFDHLPPARVEGATAFVSIMEGCSKYCSYCVVPYTRGEEVNRPLDDVL 179

Query: 183 FEIAQLAEQGVREVNLLGQNVNAYRGATHDGG-ICSFAELLRLVATIDGIDRIRFTTSHP 241
            EIA LA+QGVRE+ LLGQNVNAYRG   D   I  FA L+  VA I GI+RIR+TTSHP
Sbjct: 180 VEIAGLADQGVREITLLGQNVNAYRGKMGDTAEIADFALLIEYVAEIPGIERIRYTTSHP 239

Query: 242 LEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDIQ 301
            EFT  +I  Y   P+LVS LHLPVQ GSDRIL  MKR +TA+EYKS +RKLR  RP++ 
Sbjct: 240 NEFTPRLIEAYAKVPQLVSHLHLPVQHGSDRILMAMKRGYTAMEYKSTVRKLRAIRPELA 299

Query: 302 ISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPCDLSEEVKKER 361
           +SSDFIVGFPGETD DF   MKLI D  FD SFSFIFSPRPGTPAA    D   EVK  R
Sbjct: 300 LSSDFIVGFPGETDDDFNKMMKLIDDCQFDASFSFIFSPRPGTPAAALHDDTPHEVKLAR 359

Query: 362 LYELQQQINSQAMRYSRLMLGTEQRILVEGPSKKDLMELRGRTENNRVVNFEGSPDLIGQ 421
           L+ LQ  I++   R+ + ++GT QR+LVEG S+KD  EL GRT  NRVVNFEG   L+GQ
Sbjct: 360 LHTLQAVIDANVKRFGQALVGTTQRVLVEGASRKDANELMGRTACNRVVNFEGDARLVGQ 419

Query: 422 FVDVKIVDVFPNSLRGELLRTEQEMNL 448
             D++I      +LRGE++  E  M L
Sbjct: 420 MTDLRITRSLAYTLRGEVVTNESPMAL 446