Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) from Variovorax sp. SCN45

 Score =  145 bits (365), Expect = 4e-39
 Identities = 110/399 (27%), Positives = 191/399 (47%), Gaps = 33/399 (8%)

Query: 11  GCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQLGRWKTLK 70
           GC     DS  +   L+A  GY+  +  E AD++++NTC   + A ++    +G  + L 
Sbjct: 24  GCPKALTDSELILTQLSA-EGYQTAKTFEGADLVIVNTCGFIDDAVKESLDTIG--EALA 80

Query: 71  DKKPGVVIG-VGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQSQTSDAPVMDIS 129
           +    +V G +G     Q G+ +R   P V  + GP   H   E++      DA   ++ 
Sbjct: 81  ENGRVIVTGCLGAKTGDQGGNLVRQMHPSVLAVTGP---HATQEVM------DAVHANLP 131

Query: 130 FPEIEKFDRLPEPRAEGPT-------AFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDDVL 182
            P     D +P               A++ I EGC+  CT+C++P  RG+ VSRP+ DVL
Sbjct: 132 KPHDPFIDLVPNTFGVAGLKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGDVL 191

Query: 183 FEIAQLAEQGVREVNLLGQNVNAY------RGATHDGGICSFAELLRLVATIDGIDR--- 233
            E   L E GV+E+ ++ Q+ +AY      R    DG       +L LV T+  I     
Sbjct: 192 SEAKALFEGGVKELLVISQDTSAYGVDVKYRTGFWDGKPVK-TRMLELVRTLGEIAEPYG 250

Query: 234 --IRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIR 291
             +R    +P    D++I +   + +++ +L +P+Q     +L  MKRP +  +    + 
Sbjct: 251 AWVRLHYVYPYPSVDEVIPLMA-SGQVLPYLDVPLQHSHPDVLKRMKRPASGEKNLERLA 309

Query: 292 KLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPC 351
           + R+  P++ I S FI GFPGET+++F+  +  IR+ + D +  F +SP  G  A D P 
Sbjct: 310 RWREVCPELVIRSTFIAGFPGETEQEFEHLLDFIREAEIDRAGCFAYSPVEGATANDIPG 369

Query: 352 DLSEEVKKERLYELQQQINSQAMRYSRLMLGTEQRILVE 390
            L E  ++ R     +   + ++   +  +G+  ++LV+
Sbjct: 370 MLPEPEREARRARFMEVAEAVSIAKLQRRIGSTMQVLVD 408