Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3) from Sphingobium sp. HT1-2

 Score =  367 bits (942), Expect = e-106
 Identities = 201/436 (46%), Positives = 270/436 (61%), Gaps = 6/436 (1%)

Query: 7   IKTWGCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQLGRW 66
           +K++GCQMN YD  +MA++L    G        EAD+++LNTC IREKA +KV+  +GR 
Sbjct: 20  VKSFGCQMNVYDGERMAEMLGE-RGMTAAADGAEADLVILNTCHIREKAVDKVYSDIGRL 78

Query: 67  KTLKDKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQSQTSDAPVM 126
                 +P  +I V GCVA  EG  I+ RA  VD++ GPQ  HRLP++I ++Q  +  V 
Sbjct: 79  TREDGTRP--MIAVAGCVAQAEGGEIQRRARNVDIVVGPQAYHRLPDLIGKAQRGEDAV- 135

Query: 127 DISFPEIEKFDRLP-EPRAEGPTAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDDVLFEI 185
           D   P   KF  LP   +   PTAF++IMEGC K+CTYCVVPYTRG E+SR    +L E 
Sbjct: 136 DTDMPANSKFAALPGRTKQARPTAFLTIMEGCDKFCTYCVVPYTRGAEISRSWTAILDEA 195

Query: 186 AQLAEQGVREVNLLGQNVNAYRGATHDGGICSFAELLRLVATIDGIDRIRFTTSHPLEFT 245
             L + GVRE+ LLGQNVNA+ G    G +     L R +A + G++RIR+TTSHP + +
Sbjct: 196 RALVDGGVREITLLGQNVNAWTGEDDKGRMQGMDGLARELAKLGGLERIRYTTSHPNDMS 255

Query: 246 DDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSD 305
           D +IA + D P+L+ FLHLPVQSG+DRIL  M R HT   Y  II ++R+ARPDI +S D
Sbjct: 256 DGLIAAHGDEPKLMPFLHLPVQSGNDRILKAMNRSHTVDSYLRIIERVREARPDIALSGD 315

Query: 306 FIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPCDLSEEVKKERLYEL 365
           FIVGFPGETD +F+DT+K++  V +   +SF +SPRPGTPAAD    +   V  ERL  L
Sbjct: 316 FIVGFPGETDAEFEDTLKIVDQVRYAQCYSFKYSPRPGTPAADMDHQIPAAVMDERLARL 375

Query: 366 QQQINSQAMRYSRLMLGTEQRILVEGPSKKDLMELRGRTENNRVVNFEGSPDLIGQFVDV 425
           Q  IN   + ++   +G    IL+E   +    +L G+T   + V+       IG  VDV
Sbjct: 376 QATINRHQVDFNAATVGRTTSILLERKGRYP-GQLIGKTPWLQSVHVTAPEYGIGDMVDV 434

Query: 426 KIVDVFPNSLRGELLR 441
            I+   PNSL GE+ R
Sbjct: 435 DIISAGPNSLAGEISR 450