Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., ribosomal protein S12 methylthiotransferase from Pseudomonas putida KT2440

 Score =  155 bits (391), Expect = 3e-42
 Identities = 115/390 (29%), Positives = 194/390 (49%), Gaps = 25/390 (6%)

Query: 11  GCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQLGRWKTLK 70
           GC     DS ++   L    GYE+    E+ADV+++NTC   + A+ +    +G      
Sbjct: 16  GCPKALVDSERILTQLRM-EGYEVVPTYEDADVVVVNTCGFIDSAKAESLEVIGE----A 70

Query: 71  DKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQ---SQTSDAPVMD 127
            K+ G VI V GC+  +EG SIRD  P V  + GPQ   ++   + +    +    P++D
Sbjct: 71  IKENGKVI-VTGCMGVEEG-SIRDVHPSVLSVTGPQQYEQVVNAVHEVVPPRQDHNPLID 128

Query: 128 ISFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDDVLFEIAQ 187
           +  P+  K      PR     A++ I EGC+  C++C++P  RG+ VSRP+ +VL E  +
Sbjct: 129 LVPPQGVKLT----PRHY---AYLKISEGCNHSCSFCIIPSMRGKLVSRPVGEVLSEAER 181

Query: 188 LAEQGVREVNLLGQNVNAYR-----GATHDGGICSFAELLRLVATIDGIDR-IRFTTSHP 241
           L + GV+E+ ++ Q+ +AY            G      +L L   +  +   +R    +P
Sbjct: 182 LVKAGVKEILVISQDTSAYGVDVKYKTDFWNGRPVKTRMLELCEALSSLGAWVRLHYVYP 241

Query: 242 LEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDIQ 301
               DD+I +     +++ +L +P Q  S ++L  MKRP       + I+  R+  P++ 
Sbjct: 242 YPNVDDVIPLMA-AGKILPYLDIPFQHASPKVLKSMKRPAFEDRTLARIKNWREQCPELV 300

Query: 302 ISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYP-CDLSEEVKKE 360
           I S FIVGFPGET++DFQ  +  + +   D    F +SP  G PA D    ++ ++VK+E
Sbjct: 301 IRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLAEVPDDVKQE 360

Query: 361 RLYELQQQINSQAMRYSRLMLGTEQRILVE 390
           R         + +    +L +G E  +L++
Sbjct: 361 RWDRFMAHQQAISAARLQLRIGKEIDVLID 390