Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., ribosomal protein S12 methylthiotransferase RimO from Enterobacter asburiae PDN3

 Score =  166 bits (419), Expect = 2e-45
 Identities = 130/440 (29%), Positives = 220/440 (50%), Gaps = 50/440 (11%)

Query: 11  GCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQLGRWKTLK 70
           GC  N  DS ++   L    GY++    + AD++++NTC   + A ++    +G  + L 
Sbjct: 16  GCPKNLVDSERILTELRT-EGYDVVPSYDNADMVIVNTCGFIDSAVQESLEAIG--EALS 72

Query: 71  DKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQSQTSDAPVMDISF 130
           +   G VI V GC+  +E D IR+  P V  I GP +  ++ E +            +  
Sbjct: 73  EN--GKVI-VTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHY---------VPK 119

Query: 131 PEIEKFDRLPEPRAEGPT----AFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDDVLFEIA 186
           P+   F  L   +    T    A++ I EGC+  CT+C++P  RG+ VSRP+ +VL E  
Sbjct: 120 PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLAEAK 179

Query: 187 QLAEQGVREVNLLGQNVNAY------RGATHDGGIC--SFAELLRLVATIDGIDRIRFTT 238
           +LA+ GV+E+ ++ Q+ +AY      R   H+G     S   L   ++ +    R+ +  
Sbjct: 180 RLADAGVKELLVISQDTSAYGVDVKHRSGFHNGEPVKTSMVGLCEQLSKLGIWTRLHYV- 238

Query: 239 SHPLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARP 298
            +P    DD+I +  +  +++ +L +P+Q  S RIL +MKRP +     + I++ R+  P
Sbjct: 239 -YPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296

Query: 299 DIQISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPCDLSEEVK 358
           D+ + S FIVGFPGET++DFQ  +  +++   D    F +SP  G  A +    + EEVK
Sbjct: 297 DLTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGATANELADQVPEEVK 356

Query: 359 KE---RLYELQQQINSQAMRYSRLMLGTEQRILVE--------GPSKKDLMELRGRTENN 407
           +E   R  +LQQQI+++ ++     +G E  ++V+        G S  D  E+ G    N
Sbjct: 357 EERWNRFMQLQQQISAERLQEK---VGREIMVIVDEVDEEGAIGRSMADAPEIDGAVYLN 413

Query: 408 RVVNFEGSPDLIGQFVDVKI 427
              N +      G  + VK+
Sbjct: 414 GETNVKP-----GDIIRVKV 428