Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Escherichia coli ECRC62

 Score =  164 bits (416), Expect = 4e-45
 Identities = 125/424 (29%), Positives = 214/424 (50%), Gaps = 45/424 (10%)

Query: 11  GCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQLGRWKTLK 70
           GC  N  DS ++   L    GY++    ++AD++++NTC   + A ++    +G  + L 
Sbjct: 16  GCPKNLVDSERILTELRT-EGYDVVPSYDDADMVIVNTCGFIDSAVQESLEAIG--EALN 72

Query: 71  DKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQSQTSDAPVMDISF 130
           +   G VI V GC+  +E D IR+  P V  I GP +  ++ E +            +  
Sbjct: 73  EN--GKVI-VTGCLGAKE-DQIREVHPKVLEITGPHSYEQVLEHVHHY---------VPK 119

Query: 131 PEIEKFDRLPEPRAEGPT----AFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDDVLFEIA 186
           P+   F  L   +    T    A++ I EGC+  CT+C++P  RG+ VSRP+ +VL E  
Sbjct: 120 PKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLSEAK 179

Query: 187 QLAEQGVREVNLLGQNVNAY------RGATHDGGIC--SFAELLRLVATIDGIDRIRFTT 238
           +L + GV+E+ ++ Q+ +AY      R   H+G     S   L   ++ +    R+ +  
Sbjct: 180 RLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTSMVSLCEQLSKLGIWTRLHYV- 238

Query: 239 SHPLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARP 298
            +P    DD+I +  +  +++ +L +P+Q  S RIL +MKRP +     + I++ R+  P
Sbjct: 239 -YPYPHVDDVIPLMAEG-KILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWREICP 296

Query: 299 DIQISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPCDLSEEVK 358
           ++ + S FIVGFPGET++DFQ  +  +++   D    F +SP  G  A   P  + EEVK
Sbjct: 297 ELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGADANALPDQVPEEVK 356

Query: 359 KE---RLYELQQQINSQAMRYSRLMLGTEQRILVE--------GPSKKDLMELRGRTENN 407
           +E   R  +LQQQI+++ ++     +G E  ++++        G S  D  E+ G    N
Sbjct: 357 EERWNRFMQLQQQISAERLQEK---VGREILVIIDEVDEEGAIGRSMADAPEIDGAVYLN 413

Query: 408 RVVN 411
              N
Sbjct: 414 GETN 417