Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., 30S ribosomal protein S12 methylthiotransferase RimO from Dickeya dadantii 3937

 Score =  166 bits (419), Expect = 2e-45
 Identities = 136/466 (29%), Positives = 228/466 (48%), Gaps = 56/466 (12%)

Query: 1   MSKKLLIKTWGCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVF 60
           +S+K+   + GC  N  DS ++   L    GY++     +AD++++NTC   + A ++  
Sbjct: 32  LSRKIGFVSLGCPKNLVDSERILTELRT-EGYQVVPSYNDADLVIVNTCGFIDSAVQESL 90

Query: 61  HQLGRWKTLKDKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQSQT 120
             +G  + L +   G VI V GC+  ++ + IR+  P V  I GP +  ++   +     
Sbjct: 91  EAIG--EALNEN--GKVI-VTGCLGAKD-NQIREVHPNVLEITGPHSYEQVLNHVHHY-- 142

Query: 121 SDAPVMDISFPEIEKFDRLPEPRAEGPT----AFVSIMEGCSKYCTYCVVPYTRGEEVSR 176
                  +  PE + F  L   +    T    A++ I EGC   CT+C++P  RG+  SR
Sbjct: 143 -------VPKPEHDPFTSLIPAQGVKLTPRHYAYLKISEGCDHRCTFCIIPSMRGDLDSR 195

Query: 177 PMDDVLFEIAQLAEQGVREVNLLGQNVNAY------RGATHDGGIC--SFAELLRLVATI 228
           P+  VL E  +LA+ GV+E+ ++ Q+ +AY      R    +G     S   L   ++T+
Sbjct: 196 PIGSVLDEAKRLADAGVKELLVISQDTSAYGADVKNRTGFWNGQPVKTSMVSLCEQLSTL 255

Query: 229 DGIDRIRFTTSHPLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKS 288
               R+ +   +P    DD+I +     +++ +L +P+Q  S +IL +MKRP        
Sbjct: 256 GLWVRLHYV--YPYPHVDDVIPLMA-AGKVLPYLDIPLQHASPKILKLMKRPGAVERTLE 312

Query: 289 IIRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAAD 348
            I++ R+  P++ + S FIVGFPGET++DFQ  +  +++   D    F +SP  G  A D
Sbjct: 313 RIKRWREICPELTLRSTFIVGFPGETEEDFQMLLDFLQEAQLDRVGCFRYSPVEGAAAND 372

Query: 349 YPCDLSEEVKKERLY---ELQQQINSQAMRYSRLMLGTEQRILVE--------GPSKKDL 397
            P  + EEVK+ER +   ++QQQI+SQ +   +  +G E ++L++        G S  D 
Sbjct: 373 LPDQVPEEVKEERYHRFMQIQQQISSQRL---QAKVGRELKVLIDEVDEEGAIGRSMADA 429

Query: 398 MELRGR---TENNRVVNFEGSPDLIGQFVDVKIVDVFPNSLRGELL 440
            E+ G       NRV         +G  V VKI       L G L+
Sbjct: 430 PEIDGAVYLNGENRV--------KVGDLVTVKIEHADEYDLWGSLV 467