Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  149 bits (376), Expect = 2e-40
 Identities = 110/392 (28%), Positives = 174/392 (44%), Gaps = 31/392 (7%)

Query: 9   TWGCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFHQLGRWKT 68
           T+GC++N Y+S  M      A            + +L+NTC++  +A  +    + R   
Sbjct: 8   TFGCRLNTYESEVMRAEAEKAG---------LNNAVLVNTCAVTGEAVRQARQAIRR--- 55

Query: 69  LKDKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQSQTSDAPVMDI 128
            +   P   I V GC A  E  +  D  P VD + G +      E +K +     P   +
Sbjct: 56  ARRDNPHARIIVTGCAAQTEKQTFADM-PEVDAVLGNE------EKLKSASYRALPDFGV 108

Query: 129 SFPEIEKFDRLPEPRAEGPT----------AFVSIMEGCSKYCTYCVVPYTRGEEVSRPM 178
           S  E  + + +   +A  P           AF+ +  GC   CT+C++PY RG   S PM
Sbjct: 109 SAEEKLRVNDIMSIKATAPQMVKHIDGHVRAFIQVQNGCDHRCTFCIIPYGRGNSRSVPM 168

Query: 179 DDVLFEIAQLAEQGVREVNLLGQNVNAYRGATHDGGICSFAELLRLVATIDGIDRIRFTT 238
             V+ +  +L E G  E+ L G +  +Y GA   G          L+  +  I R+R ++
Sbjct: 169 GAVVDQARRLTESGYCEIVLTGVDATSY-GADLPGEPSLGYLAKTLLKQVPDIIRLRLSS 227

Query: 239 SHPLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARP 298
              +E    ++ +  D P  +  LHL +Q G D IL  MKR H   +      ++R  RP
Sbjct: 228 IDSIEADHHLMDLIADEPRFMPHLHLSLQHGDDMILKRMKRRHLRADAIRFCNEVRSLRP 287

Query: 299 DIQISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADYPCDLSEEVK 358
           DI   +D I GFP ET++  ++   L  +        F +SPR GTPA   P  L   + 
Sbjct: 288 DIAFGADMIAGFPTETEEMLENAATLAEECGISSLHVFPYSPREGTPAVRMP-QLDRALV 346

Query: 359 KERLYELQQQINSQAMRYSRLMLGTEQRILVE 390
           KER   L+ +  +    + + M+G+ Q +LVE
Sbjct: 347 KERAGRLRARGEALKQAHLQNMVGSVQTVLVE 378