Pairwise Alignments

Query, 474 a.a., tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., Ribosomal protein S12 methylthiotransferase RimO from Acinetobacter radioresistens SK82

 Score =  148 bits (373), Expect = 4e-40
 Identities = 131/465 (28%), Positives = 216/465 (46%), Gaps = 49/465 (10%)

Query: 2   SKKLLIKTWGCQMNEYDSSKMADLLNAANGYELTEIPEEADVLLLNTCSIREKAQEKVFH 61
           S K+   + GC     DS ++   L    GY++    + AD++++NTC   E A ++   
Sbjct: 3   SPKVGFVSLGCPKALVDSERILTQLKT-EGYQVASDYDGADLVVVNTCGFIESAVQESLD 61

Query: 62  QLGRWKTLKDKKPGVVIGVGGCVATQEGDSIRDRAPYVDVIFGPQTLHRLPEMIKQSQTS 121
            +G   +    + G VI V GC+   E D IR   P V  + G      +   + Q    
Sbjct: 62  AIGEAMS----ENGRVI-VTGCLGKDE-DKIRQMHPNVLKVTGAAAYEDVMSAVHQYVP- 114

Query: 122 DAPVMDISFPEIEKFDRLPEPRAEGPT---AFVSIMEGCSKYCTYCVVPYTRGEEVSRPM 178
            AP     F      D +PE          A++ I EGC+  CT+C++P  RG+ VSRP+
Sbjct: 115 -APPKHNPF-----IDLVPEQGVRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPV 168

Query: 179 DDVLFEIAQLAEQGVREVNLLGQNVNAYRGATH--------DGGICSFAELLRLVATIDG 230
             VL E A L   GVRE+ ++ Q+ +AY   T               F ++   +  +  
Sbjct: 169 GSVLEEAAALKRAGVREILVISQDTSAYGVDTKYKLDFWNGQPVKTKFFDMCEALGQLGI 228

Query: 231 IDRIRFTTSHP-LEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSI 289
             R+ +   +P ++   D++A      +++ +L +P Q  S RIL +MKRP  +      
Sbjct: 229 WVRLHYVYPYPHVDAVIDLMA----QGKILPYLDIPFQHASPRILKLMKRPAHSENTLER 284

Query: 290 IRKLRKARPDIQISSDFIVGFPGETDKDFQDTMKLIRDVDFDMSFSFIFSPRPGTPAADY 349
           ++  R+  PD+ I S F+VGFPGET++DFQ  ++ +++   D    F +SP  G  A D 
Sbjct: 285 LKVWREKCPDLVIRSTFVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDL 344

Query: 350 PCDLSEEVKK---ERLYELQQQINSQAMRYSRLMLGTEQRILVE----------GPSKKD 396
           P  + EEVK+   ER  ++QQ+I++  +   +  +G    +LV+            S  D
Sbjct: 345 PDHVPEEVKQERYERFMQVQQEISAAKL---QKRIGQTMTVLVDNLEEEFPVAVARSYAD 401

Query: 397 LMELRGRTENNRVVNFEGSPDLIGQFVDVKIVDVFPNSLRGELLR 441
             E+ G   N  V + + S    G  ++V+I D     L  +L+R
Sbjct: 402 APEIDG---NVFVEDIDKSQIKSGDLLEVEITDADEYDLFAKLIR 443