Pairwise Alignments

Query, 858 a.a., leucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 943 a.a., isoleucine--tRNA ligase from Pseudomonas simiae WCS417

 Score = 86.3 bits (212), Expect = 8e-21
 Identities = 90/377 (23%), Positives = 143/377 (37%), Gaps = 63/377 (16%)

Query: 11  EHKVQQHWDNNKTFVVSEDPNKE--KFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRL 68
           E ++ Q WD+   +    +  K+  KF      PY +G +H+GH  N  + D++ R + L
Sbjct: 25  EPQILQRWDSIGLYGKLREIGKDRPKFVLHDGPPYANGTIHIGHALNKILKDMILRSKTL 84

Query: 69  QGKNVLQPIGWDAFGLPAEN----------AAVKNNTAPAPWTYENIEYMKNQLKLLGFG 118
            G +     GWD  GLP E+           A K       +  E IE  K++   LG  
Sbjct: 85  SGFDAPYVPGWDCHGLPIEHKVEVTYGKNLGADKTRELCRAYATEQIEGQKSEFIRLGVL 144

Query: 119 YDWNREFATCRPEYYRWEQEFFTKLFAKGLVYKKTSSVNWCPNDQTVLANEQVEDGCCWR 178
            +W+  + T   +    E     ++   G V+K    VNWC +  + LA  +VE      
Sbjct: 145 GEWDNPYKTMNFKNEAGEIRALAEIVKGGFVFKGLKPVNWCFDCGSALAEAEVE------ 198

Query: 179 CDTPVEQKEIPQWFIKITAYAQELLDDLDNLDGWPEMVKTMQRNWIGRSEGVELKFAVKG 238
                E K+           A  + DD    + +                      A  G
Sbjct: 199 ----YEDKK-----SSTIDVAFPIADDTKLAEAF--------------------GLASLG 229

Query: 239 ENTDLEVYTTRPDTLMGVTYVGIAAGHPLATKAAANNPALAAFIDECKNTKVAEAEIATM 298
           +   + ++TT P T+     + +   HP  T A  +       + E    ++ EA +A  
Sbjct: 230 KPAAIVIWTTTPWTIPANQALNV---HPEFTYALVDVGDRLLVLAE----EMVEACLARY 282

Query: 299 EKKGMATGLTA---------IHPLNGREVPIYIANFVLMDYGTGAVMAVPAHDQRDFEFA 349
           E +G     T           HP   R  P+Y+A++V +  GTG V   PA+   DF   
Sbjct: 283 ELQGSVIATTTGSALELINFRHPFYDRLSPVYLADYVELGSGTGIVHCSPAYGVDDFVIC 342

Query: 350 TKYGLDIIPVIKPADGS 366
            KYGL    +I P   +
Sbjct: 343 KKYGLVNDDIINPVQSN 359



 Score = 59.7 bits (143), Expect = 8e-13
 Identities = 60/232 (25%), Positives = 93/232 (40%), Gaps = 65/232 (28%)

Query: 419 DWGVSRQRYWGAPIP-MVTTEDGQVHPVPADQLPVILPEDVVMDGVTSPIKADKEWAKTT 477
           DW +SRQR WG PIP  +  E G++HP   + + V+  + V  +G+ +  K D   A+  
Sbjct: 464 DWCISRQRNWGVPIPFFLNKESGELHPRTVELMEVV-AQRVEQEGIEAWFKLDA--AELL 520

Query: 478 FNGEPAL-RETDTFDTFMESS---WYYARYCSPQADDILDPEKANYWLPVDQYIGGIEHA 533
            +  P   + +DT D + +S    W+  R   P   +   P    Y    DQ+ G     
Sbjct: 521 GDEAPQYDKISDTLDVWFDSGTTHWHVLRGSHPMGHE-TGPRADLYLEGSDQHRG----- 574

Query: 534 CMHLLYSRFFHKLLRDAGYVKSDEPFKKLLCQGMVLADAFYYTNDKGGKEWVSPTEVKVE 593
                   +FH  L     + +  P+++LL  G                           
Sbjct: 575 --------WFHSSLLTGCAIDNHAPYRELLTHGF-------------------------- 600

Query: 594 RDGKGRIVSAVDATGRQVEHSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFM 645
                     VD TGR        KMSKS  N I+P+++ D  GAD +RL++
Sbjct: 601 ---------TVDETGR--------KMSKSLKNVIEPKKINDTLGADIMRLWV 635



 Score = 29.3 bits (64), Expect = 0.001
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 27/94 (28%)

Query: 176 CWRCDTPVEQKEIPQWFI----------KITAYAQELLDDLDNLDGW------------P 213
           CWR  TP+  +   QWFI           +   + + ++D   +  W            P
Sbjct: 404 CWRHKTPLIYRATAQWFIGMDKEPTTGDTLRVRSLKAIEDTQFVPAWGQARLHSMIANRP 463

Query: 214 EMVKTMQRNWIGRSEGVELKFAVKGENTDLEVYT 247
           +   + QRNW     GV + F +  E+ +L   T
Sbjct: 464 DWCISRQRNW-----GVPIPFFLNKESGELHPRT 492