Pairwise Alignments

Query, 858 a.a., leucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 952 a.a., valine--tRNA ligase from Dickeya dadantii 3937

 Score =  119 bits (299), Expect = 6e-31
 Identities = 114/433 (26%), Positives = 163/433 (37%), Gaps = 107/433 (24%)

Query: 1   MQEQYNPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGD 60
           M++ YNP DIE  + +HW+    F    D ++E F  +   P  +G LHMGH    TI D
Sbjct: 1   MEKTYNPHDIEQPLYEHWEKQGYFKPHGDTSQESFSIMIPPPNVTGSLHMGHAFQQTIMD 60

Query: 61  VVSRFQRLQGKNVLQPIGWDAFGLPAENAAVKNNTAPA-----------------PWTYE 103
            + R+QR+QGKN L   G D  G+  +    +   A                    W  E
Sbjct: 61  TMIRYQRMQGKNTLWQAGTDHAGIATQMVVERKIAAEEGKTRHDYGRDAFIDKIWQWKAE 120

Query: 104 NIEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVYKKTSSVNWCPNDQ 163
           +   +  Q++ LG   DW RE  T         +E F +L+ + L+Y+    VNW P  +
Sbjct: 121 SGGTITRQMRRLGNSVDWERERFTMDDGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLR 180

Query: 164 TVLANEQVED----GCCWRCDTPVEQKEIPQWFIKITAYAQELLDDLDNLDGWPEMVKTM 219
           T +++ +VE+    G  W    P                   L D     DG        
Sbjct: 181 TAISDLEVENRDVKGSMWHLRYP-------------------LADGAKTADG-------- 213

Query: 220 QRNWIGRSEGVELKFAVKGENTDLEVYTTRPDTLMGVTYVGIAAGHPLATKAAANNPALA 279
                               N  L V TTRP+T++G T V +             NP   
Sbjct: 214 --------------------NDYLVVATTRPETVLGDTGVAV-------------NPEDP 240

Query: 280 AFIDECKNTKVAEAEIATMEKKGMATGLTAIHPLNGREVPIYIANFVLMDYGTGAVMAVP 339
            + D                      G   I PL GR +PI       M+ GTG V   P
Sbjct: 241 RYKD--------------------LIGKFLILPLVGRRIPIVGDEHADMEKGTGCVKITP 280

Query: 340 AHDQRDFEFATKYGLDIIPVIKPADGSELDVSEAAYT--EKGVLFASG---EFDGLDFQA 394
           AHD  D+E   ++ L +I ++   DG     +E   T  E    ++S     F GL+  A
Sbjct: 281 AHDFNDYEVGKRHQLPMINIL-TFDGDIRQEAEVFSTNGEASTAYSSDIPEAFRGLERFA 339

Query: 395 AFNAIAAKLEAEG 407
           A  AI A  +  G
Sbjct: 340 ARKAIVAAFDELG 352



 Score = 39.7 bits (91), Expect = 9e-07
 Identities = 63/269 (23%), Positives = 94/269 (34%), Gaps = 67/269 (24%)

Query: 593 ERDGKGRI-VSAVDATGRQVEHSGMIKMSKSKNNGIDPQEMVD----------------- 634
           + DGK ++    V  TG   +  G  KMSKSK N IDP +MVD                 
Sbjct: 529 DEDGKPQVPFHTVYMTGLIRDEEGQ-KMSKSKGNVIDPLDMVDGISLEALLEKRTGNMMQ 587

Query: 635 --------------------KYGADTVRLFMMFASPADMTLEWQESGVEGANRFLRRVWK 674
                                +G D +R  +   +     + W    +EG   F  ++W 
Sbjct: 588 PQLAEKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWN 647

Query: 675 LVR------EHTELGQAPALDASALNADQKAL---RRDVHKTIAKVTD----DVARRQTF 721
             R      E  + G     +     AD+  L    R V KT  +  D    D+A    +
Sbjct: 648 ASRFVLMNTEDQDCGFTGGGEKVLSLADRWILAEFNRTV-KTYREALDGYRFDLAANVLY 706

Query: 722 NTAIAAIMELMNKLTKAPMTEAQD------RAILDEALKAITLMLYPITPHICFEMW--- 772
                   +   +LTK  MT   D      R  L   L+A+  + +PI P I   +W   
Sbjct: 707 EFTWNQFCDWYLELTKPVMTGGSDAELRGTRHTLVTVLEALLRLAHPIIPFITETIWQRV 766

Query: 773 ---VALGQSNIDTASWPTYDEAALVEDEK 798
                +    I    +P +D  A +EDE+
Sbjct: 767 KVLKGVTDDTIMLQPFPAFD--ATLEDEQ 793