Pairwise Alignments

Query, 858 a.a., leucine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 877 a.a., valyl-tRNA synthetase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  100 bits (250), Expect = 3e-25
 Identities = 98/377 (25%), Positives = 144/377 (38%), Gaps = 99/377 (26%)

Query: 1   MQEQYNPQDIEHKVQQHWDNNKTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGD 60
           +  +YNP + E K    W  NK F    D NKE +  +   P  +G LHMGH+ N TI D
Sbjct: 3   LSTKYNPAEAESKWYAFWMENKLFSSKVDYNKEPYSIVIPPPNVTGVLHMGHMLNNTIQD 62

Query: 61  VVSRFQRLQGKNVLQPIGWDAFGLPAEN---AAVKNN-------------TAPAPWTYEN 104
           V+ R  R++GKN     G D   +  E    A +K               T    W  + 
Sbjct: 63  VLVRKARMEGKNACWVPGTDHASIATEAKVVALLKEKGIDKKSISREDFLTHAWEWKEKY 122

Query: 105 IEYMKNQLKLLGFGYDWNREFATCRPEYYRWEQEFFTKLFAKGLVYKKTSSVNWCPNDQT 164
              +  QLK LG   DW+R   T            F  L  KG +Y+    VNW P  +T
Sbjct: 123 GGIILEQLKKLGASCDWDRTKFTMDAGLSDAVTSVFVDLHNKGKIYRGIRMVNWDPQGKT 182

Query: 165 VLANEQVEDGCCWRCDTPVEQKEIPQWFIKITAYAQELLDDLDNLDGWPEMVKTMQRNWI 224
            L++++V                                           + K +Q    
Sbjct: 183 ALSDDEV-------------------------------------------IFKEVQ---- 195

Query: 225 GRSEGVELKFAVKGENTD-LEVYTTRPDTLMGVTYVGIAAGHPLATKAAANNPALAAFID 283
             S+   + + ++G  T+ L V TTRP+T+M             A  A   NP       
Sbjct: 196 --SKLYYINYKIEGSETEYLTVATTRPETIM-------------ADVAICINP------- 233

Query: 284 ECKNTKVAEAEIATMEKKGMATGLTAIHPLNGREVPIYIANFVLMDYGTGAVMAVPAHDQ 343
              N K          +     G  A+ PL  R +PI   ++V M++GTG +   PAHD 
Sbjct: 234 ---NDK----------RFAHLKGKKALIPLINRAIPIVEDDYVDMEFGTGCLKVTPAHDV 280

Query: 344 RDFEFATKYGLDIIPVI 360
            D+E   ++ L++I +I
Sbjct: 281 NDYEIGLRHKLEVIDII 297



 Score = 68.9 bits (167), Expect = 1e-15
 Identities = 89/394 (22%), Positives = 145/394 (36%), Gaps = 95/394 (24%)

Query: 417 LRDWGVSRQRYWGAPIPMVTTEDGQVHPVPADQLPVILPEDVVMDGV-TSPIKADKEWAK 475
           +RDW +SRQ +WG  IP     +G+       +  + +  D   +    + +  D++   
Sbjct: 398 VRDWCISRQLWWGHQIPAFYLPNGEYVVAKTAEEALEIANDKYNENYGLNDLTQDEDVLD 457

Query: 476 TTFNG---EPALRETDTFDTFM---ESSWYYARYCSPQADDILDPEKANYWLPVDQYIGG 529
           T F+      ++ +TD F T     E S+YY     P  D +  PE   +W+     I G
Sbjct: 458 TWFSSWLWPISVFDTDVFTTGKKNEELSYYY-----PTNDLVTAPEILFFWV-ARMIIAG 511

Query: 530 IEHACMHLLYSRFFHKLLRDAGYVKSDEPFKKLLCQGMVLADAFYYTNDKGGKEWVSPTE 589
            E+                       ++PF+ +   G+V                     
Sbjct: 512 YEYM---------------------GEKPFRNVYLTGIV--------------------- 529

Query: 590 VKVERDGKGRIVSAVDATGRQVEHSGMIKMSKSKNNGIDPQEMVDKYGADTVRLFMMFAS 649
               RD +GR                  KMSKS  N  DP E++  YGAD VR  M+F+S
Sbjct: 530 ----RDKQGR------------------KMSKSLGNSPDPLELIKNYGADGVRTGMLFSS 567

Query: 650 PADMTLEWQESGVEGANRFLRRVWKLVR---------EHTELGQAPALDASALNADQKAL 700
           PA   L + E  VE    F  ++W   R            E     A++      DQ   
Sbjct: 568 PAGNDLPFDEKLVEQGRNFANKIWNAFRLIKGWEVDSNILEHHNHTAINWFESRFDQALE 627

Query: 701 RRDVHKTIAKVTDDVARRQTFNTAIAAIMELMNKLTKAPMTEAQDRAILDEAL---KAIT 757
             + H +  +++D  A   T+            ++ K    +  D    ++ L   +AI 
Sbjct: 628 EIEDHFSKFRISD--ALMSTYKLVWDDFCSWYLEMVKPEYQKPIDLETYEKTLGYFEAIM 685

Query: 758 LMLYPITPHICFEMWVALGQSNIDTA----SWPT 787
            +L+P  P I  E+W  +   ++  A    SWP+
Sbjct: 686 KILHPFMPFITEELWHQVKGRDVKDALIISSWPS 719



 Score = 28.5 bits (62), Expect = 0.002
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 6/51 (11%)

Query: 178 RCDTPVEQKEIPQWFIK---ITAYA-QELLDDLDNLDGWPEMVKTMQRNWI 224
           R D  +E K   QWF+K   IT  A + ++DD+  L  +P   K M R+W+
Sbjct: 347 RTDAVIEPKLSLQWFLKMEDITKPALKAVMDDIIQL--YPPKFKNMYRSWM 395