Pairwise Alignments

Query, 342 a.a., DNA polymerase III subunit delta from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., DNA polymerase III subunit delta from Pseudomonas simiae WCS417

 Score =  170 bits (430), Expect = 6e-47
 Identities = 110/343 (32%), Positives = 178/343 (51%), Gaps = 4/343 (1%)

Query: 1   MRIYAEKLAESLHKTLYPIYLVFGNEPLLLQEAKTAIEKTAQAQGFLEKHRFSADAGLDW 60
           M++   +LA+ L   L P+Y+V G++PLL QEA  AI   A+ QGF E+  FSADA  DW
Sbjct: 1   MKLAPAQLAKHLQGGLAPVYIVSGDDPLLCQEAADAIRTAARQQGFDERQVFSADASFDW 60

Query: 61  NAVYDCCQALSLFSSRQLIEIEIPESGVNAQTAKELSALVGQLHQDILLLVIGPKLTKAQ 120
             +     ++SLF+ ++L+E+ +P      + A  L     +  +D +LL+  PKL  + 
Sbjct: 61  GTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALMEYCSRPAEDTVLLISLPKLDGSA 120

Query: 121 ENAAWFKTLAQQA--CWVNCLTPELSRLPQFVQQRCFALGLKPDAEAVQMLAQWHEGNLF 178
           +   W K L + A   ++     + ++LPQ+++QR    GL    +AV+++A   EGNL 
Sbjct: 121 QKTKWGKALVEGAHTQFIQIWPVDSNQLPQWIRQRLSQSGLSATQDAVELIAARVEGNLL 180

Query: 179 ALAQSLEKLALLYPDGLLTLVRLEESLSRHNHFTPYHWMDALLEGKANRAQRILRQLMLE 238
           A AQ +EKL L+  DG +T+  ++ +++    F  +  +DA+L G+   A R+L  L  E
Sbjct: 181 AAAQEIEKLKLMAEDGQITVETVQGAVADSARFDVFGLVDAILNGEPAHALRMLEGLRGE 240

Query: 239 ESEPIILIRTAQKELTQLLKWQQERQQLGNLGSLFDRYR--VWQNRRPLYSAALQRLPSR 296
             EP +++    +EL  L     +  Q   L   F + R  VW  R+PL S ALQR  ++
Sbjct: 241 GVEPPVILWALARELRVLANIALQYSQGTPLDKAFSQARPPVWDKRKPLMSKALQRHSAQ 300

Query: 297 ALLRLVGILTQAELLAKTQYEQPVWPILQQLSLECCNPQANLP 339
              +L+    + +   K Q     W  L +LSL     +  LP
Sbjct: 301 RWAQLLLEAQRIDAQIKGQAAGSPWMSLSRLSLLMAGQRLTLP 343