Pairwise Alignments

Query, 342 a.a., DNA polymerase III subunit delta from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., DNA polymerase III subunit delta from Variovorax sp. OAS795

 Score =  149 bits (377), Expect = 8e-41
 Identities = 109/354 (30%), Positives = 170/354 (48%), Gaps = 14/354 (3%)

Query: 1   MRIYAEKLAESLHKTLYPIYLVFGNEPLLLQEAKTAIEKTAQAQGFLEKHRFS-ADAGLD 59
           M++ + +L   L K L  +Y + G+EPLL QEA  AI   A+ QG+ E+  ++ A A  D
Sbjct: 1   MQLASAQLGPHLQKGLKSLYTIHGDEPLLAQEAADAIRAAARTQGYTERSSYTVAGAHFD 60

Query: 60  WNAVYDCCQALSLFSSRQLIEIEIPES--GVNAQTAKELSALVGQLHQDILLLVIGPKLT 117
           W+AV     +LSLF+ +Q++EI IP    G +  TA +  A   Q +   L LV+ P+L 
Sbjct: 61  WSAVLAAGGSLSLFADKQIVEIRIPSGKPGKDGSTALQQLAEAAQGNDSTLTLVMLPRLD 120

Query: 118 KAQENAAWFKTLAQQACWVNCLTPELSRLPQFVQQRCFALGLK--PDAEA---VQMLAQW 172
           K     AWF  L      +     E + LPQ++ QR    G +  P  E    +Q  A  
Sbjct: 121 KGTRTGAWFSALENNGVTLQVEPIERAALPQWIAQRLGLQGQRVMPGDEGQRTLQFFADR 180

Query: 173 HEGNLFALAQSLEKLALLYPDGLLTLVRLEESLSRHNHFTPYHWMDALLEGKANRAQRIL 232
            EGNL A  Q ++KLALL+P G L+  ++E +++    +  +   +A+L G   R  R+L
Sbjct: 181 VEGNLLAAHQEIQKLALLHPAGELSWEQVEAAVNNVARYDVFKLSEAVLAGNPQRVARML 240

Query: 233 RQLMLEESEPIILIRTAQKELTQLLKWQQERQQLGNLGSLFDRYRVWQNRRPLYSAALQR 292
             L  E    +++  T  +++  L + +        L       R+W  R   +   L R
Sbjct: 241 DGLQAEGEAEVLVHYTLAEDIRALKRVKDAMASGRPLPMALRENRIWGPRERAFERVLPR 300

Query: 293 LPSRALLRLVGILTQAELLAKTQYEQPVWP-----ILQQLSLECCNPQANLPLP 341
           L  R L RL+      + + K   +QP WP      LQ+L+L  C   ++ P P
Sbjct: 301 LDDRMLARLLRAAHVVDGICK-GLKQPDWPASGWQALQRLALMLCRACSSGPAP 353