Pairwise Alignments

Query, 342 a.a., DNA polymerase III subunit delta from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., DNA polymerase III, delta subunit from Pseudomonas putida KT2440

 Score =  178 bits (451), Expect = 2e-49
 Identities = 117/343 (34%), Positives = 178/343 (51%), Gaps = 4/343 (1%)

Query: 1   MRIYAEKLAESLHKTLYPIYLVFGNEPLLLQEAKTAIEKTAQAQGFLEKHRFSADAGLDW 60
           M++   +L + L   L P+Y+V G++PLL QEA  AI   A+ QGF E+  FSADA  DW
Sbjct: 1   MKLAPAQLNKHLQGALAPVYVVSGDDPLLCQEAADAIRNAARQQGFDERQVFSADANFDW 60

Query: 61  NAVYDCCQALSLFSSRQLIEIEIPESGVNAQTAKELSALVGQLHQDILLLVIGPKLTKAQ 120
             +     +LSLF+ R+L+E+ +P      + A  L        +D LLL+  PKL  + 
Sbjct: 61  GTLLQAGASLSLFAQRRLLELRLPSGKPGDKGAAALMEYCANPAEDTLLLISLPKLDSSA 120

Query: 121 ENAAWFKTLAQQA-C-WVNCLTPELSRLPQFVQQRCFALGLKPDAEAVQMLAQWHEGNLF 178
           +   W K L + A C ++     ++ +LPQ++ QR    GL    +AV ++A   EGNL 
Sbjct: 121 QKTKWGKALIEGAHCQFIQIWPVDVHQLPQWINQRLQQAGLSAQRDAVDLIAARVEGNLL 180

Query: 179 ALAQSLEKLALLYPDGLLTLVRLEESLSRHNHFTPYHWMDALLEGKANRAQRILRQLMLE 238
           A AQ +EKL LL     +T+  ++ +++    F  +  +DA+L G+A  A R+L  L  E
Sbjct: 181 AAAQEIEKLKLLAEGSQITVETVQAAVADSARFDVFGLVDAILNGEAAHALRMLEGLRGE 240

Query: 239 ESEPIILIRTAQKELTQLLKWQQERQQLGNLGSLFDRYR--VWQNRRPLYSAALQRLPSR 296
             EP +++    +EL QL    Q+  Q   L   F + R  +W  RRPL S ALQRL ++
Sbjct: 241 GVEPPVILWALARELRQLAGLAQQFSQGVPLDKAFSQARPPIWDKRRPLVSKALQRLSAQ 300

Query: 297 ALLRLVGILTQAELLAKTQYEQPVWPILQQLSLECCNPQANLP 339
              +L+    + +   K Q E   W  L +LSL     +  LP
Sbjct: 301 RWAQLLQDAQRIDAQIKGQAEGSPWIGLARLSLLMAGQRLALP 343