Pairwise Alignments

Query, 342 a.a., DNA polymerase III subunit delta from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., DNA polymerase III delta subunit (EC 2.7.7.7) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  128 bits (321), Expect = 2e-34
 Identities = 100/343 (29%), Positives = 159/343 (46%), Gaps = 14/343 (4%)

Query: 1   MRIYAEKLAESLHKTLYPIYLVFGNEPLLLQEAKTAIEKTAQAQGFLEKHRFS-ADAGLD 59
           M+I A +LA  L + L  +Y + G+EPLL+QEA  AI   A+ QG+ E+   + A A  D
Sbjct: 1   MQIAAPQLAAQLQRGLKSLYTLHGDEPLLVQEAADAIRTVAREQGYTERTVHTVAGAHFD 60

Query: 60  WNAVYDCCQALSLFSSRQLIEIEIPES--GVNAQTAKELSALVGQLHQDILLLVIGPKLT 117
           W  V     ++SLF+ +QLIEI IP    G +     +  A   Q +   L LV+ P+L 
Sbjct: 61  WGEVLASGGSMSLFADKQLIEIRIPSGKPGKDGSQVLQQIAEAAQGNDSTLTLVLLPRLD 120

Query: 118 KAQENAAWFKTLAQQACWVNCLTPELSRLPQFVQQRCFALGLKPDA-----EAVQMLAQW 172
            A +  AWF  L      V     +   LP ++ QR    G +  +       +Q  A  
Sbjct: 121 MATQKGAWFAALESFGATVKLDPVDRKALPSWIAQRLQQQGQRVASGEEGQRTLQFFADR 180

Query: 173 HEGNLFALAQSLEKLALLYPDGLLTLVRLEESLSRHNHFTPYHWMDALLEGKANRAQRIL 232
            EGNL A  Q ++KLALL+P G L+  ++E ++     +  +   +A+L G+  R QR+L
Sbjct: 181 VEGNLLAAHQEIQKLALLHPAGELSFEQVEGAVLNVARYDAFKLAEAVLGGQVQRVQRML 240

Query: 233 RQLMLEESEPIILIRTAQKELTQLLKWQQERQQLGNLGSLFDRYRVWQNRRPLYSAALQR 292
             L  E   P+++     +++  L + +        L       RVW  +  L   A+  
Sbjct: 241 DGLQAEGEAPVLVHWALSEDIRTLHRIRTAMDAGRPLPMALRENRVWGVKEKLMERAIPL 300

Query: 293 LPSRALLRLVGILTQAELLAKTQYEQPVWP-----ILQQLSLE 330
           L    L R +      + + K   + P WP      LQQ++++
Sbjct: 301 LSIATLSRWLDDAHTVDGIVK-GLKAPSWPADPWQALQQMAMK 342