Pairwise Alignments

Query, 342 a.a., DNA polymerase III subunit delta from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., DNA polymerase III delta subunit (EC 2.7.7.7) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  311 bits (797), Expect = 2e-89
 Identities = 162/331 (48%), Positives = 228/331 (68%), Gaps = 1/331 (0%)

Query: 3   IYAEKLAESLHKTLYPIYLVFGNEPLLLQEAKTAIEKTAQAQGFLEKHRFSADAGLDWNA 62
           +Y E+L   L++ L   YL+ GN+PLLLQE++ AI   A +QGF E H F+ D   DW +
Sbjct: 1   LYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAIRLAAASQGFEEHHAFTLDPSTDWGS 60

Query: 63  VYDCCQALSLFSSRQLIEIEIPESGVNAQTAKELSALVGQLHQDILLLVIGPKLTKAQEN 122
           ++  CQA+SLF+SRQ + +++PE+G NA   ++L+ L   LH D+LL+V G KLTKAQEN
Sbjct: 61  LFSLCQAMSLFASRQTLVLQLPENGPNAAMNEQLATLSELLHDDLLLIVRGNKLTKAQEN 120

Query: 123 AAWFKTLAQQACWVNCLTPELSRLPQFVQQRCFALGLKPDAEAVQMLAQWHEGNLFALAQ 182
           AAW+  LA ++  V+C TPE ++LP++V  R  A  L+ D  A Q+L   +EGNL ALAQ
Sbjct: 121 AAWYTALADRSVQVSCQTPEQAQLPRWVAARAKAQNLQLDDAANQLLCYCYEGNLLALAQ 180

Query: 183 SLEKLALLYPDGLLTLVRLEESLSRHNHFTPYHWMDALLEGKANRAQRILRQLMLEESEP 242
           +LE+L+LL+PDG LTL R+E++++   HFTP+HW+DALL GK+ RA  IL+QL LE SEP
Sbjct: 181 ALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEGSEP 240

Query: 243 IILIRTAQKELTQLLKWQQERQQLGNLGSLFDRYRVWQNRRPLYSAALQRLPSRALLRLV 302
           +IL+RT Q+EL  L+  +++      L +LFD++RVWQNRRP+   ALQRL    L + V
Sbjct: 241 VILLRTLQRELLLLVNLKRQSAHT-PLRALFDKHRVWQNRRPMIGDALQRLHPAQLRQAV 299

Query: 303 GILTQAELLAKTQYEQPVWPILQQLSLECCN 333
            +LT+ E+  K  Y Q VW  L+ LSL  C+
Sbjct: 300 QLLTRTEITLKQDYGQSVWADLEGLSLLLCH 330