Pairwise Alignments

Query, 342 a.a., DNA polymerase III subunit delta from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., DNA polymerase III, delta subunit (EC 2.7.7.7) from Kangiella aquimarina DSM 16071

 Score =  143 bits (361), Expect = 6e-39
 Identities = 104/343 (30%), Positives = 172/343 (50%), Gaps = 8/343 (2%)

Query: 1   MRIYAEKLAESLHKTLYPIYLVFGNEPLLLQEAKTAIEKTAQAQGFLEKHRFSADAGLDW 60
           M+IY E+L ++L+ TLYP+YLV G+EPL   EA  AI    + QG LE+     +AG   
Sbjct: 1   MKIYPEQLEKNLN-TLYPVYLVAGDEPLQKMEAVDAIRAYCKQQGLLERQVIE-EAGSS- 57

Query: 61  NAVYDCCQALSLFSSRQLIEIEIPESGVNAQTAKELSALVGQLHQDILLLVIGPKLTKAQ 120
           N + D    +SLF+  +L+E    +S +     + + + +    QD+LL+   PKL+ ++
Sbjct: 58  NPLNDQAGTMSLFAESRLLEWRFDKS-IKKAHGEFIQSFINSEPQDVLLIT-APKLS-SE 114

Query: 121 ENAAWFKTLAQQACWVNCLTPELSRLPQFVQQRCFALGLKPDAEAVQMLAQWHEGNLFAL 180
           +  AW+KT+ Q+   +        RL  ++  R  +LG+  + +A+  L +  EGNL A 
Sbjct: 115 KRLAWYKTVEQKGLVIEAWPVPAERLGSWLSTRARSLGVALEPDALATLIERCEGNLLAA 174

Query: 181 AQSLEKLALLYPDGLLTLVRLEESLSRHNHFTPYHWMDALLEGKANRAQRILRQLMLEES 240
            Q L+ L+LL     ++   ++E +  +  ++ Y   DA L G+ +RA R+L  L  E  
Sbjct: 175 KQDLQMLSLLSDGQPVSSDNIKEYVGDNARYSVYELSDACLAGQTDRALRMLATLQAEGV 234

Query: 241 EPIILIRTAQKELTQLLKWQQERQQLGNLGSLFDRYRVWQNRRPLYSAALQRLPSRALLR 300
            P++ I    +E   L  W ++  Q   L ++    RVW  R+ L  AA+ +   +    
Sbjct: 235 YPLVPINQLLRECQLLADWAEQIAQGETLANIMQSQRVWPKRQKLLQAAMSKGSVKKWYA 294

Query: 301 LVGILTQAELLAKTQYEQPVWPILQQL--SLECCNPQANLPLP 341
           LV  LT  +  AK Q +  VW  L  +   +  CNP     +P
Sbjct: 295 LVQRLTYLDKSAKGQADADVWQELAHVVCLMTNCNPLRGNSVP 337