Pairwise Alignments

Query, 342 a.a., DNA polymerase III subunit delta from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., DNA polymerase III, delta subunit (EC 2.7.7.7) from Enterobacter asburiae PDN3

 Score =  306 bits (785), Expect = 4e-88
 Identities = 164/333 (49%), Positives = 221/333 (66%), Gaps = 1/333 (0%)

Query: 1   MRIYAEKLAESLHKTLYPIYLVFGNEPLLLQEAKTAIEKTAQAQGFLEKHRFSADAGLDW 60
           +R+Y E+L   L + L   YL+ GN+PLLLQE+  A+   A +QGF E H    D   DW
Sbjct: 3   IRLYPEQLRAQLKEGLRAAYLLLGNDPLLLQESLDAVRYEAASQGFDEHHTVQLDNNTDW 62

Query: 61  NAVYDCCQALSLFSSRQLIEIEIPESGVNAQTAKELSALVGQLHQDILLLVIGPKLTKAQ 120
           NA++  CQA+SLF+SRQ I+I +PE+G NA   ++L+ LV  LH D+LL+V G KLTKAQ
Sbjct: 63  NALFSLCQAMSLFASRQTIQILLPENGPNAAINEQLATLVSLLHSDLLLIVRGNKLTKAQ 122

Query: 121 ENAAWFKTLAQQACWVNCLTPELSRLPQFVQQRCFALGLKPDAEAVQMLAQWHEGNLFAL 180
           ENAAWF  LA  A  V C TPE + LP++V  R     L+ D  A Q+L   +EGNL AL
Sbjct: 123 ENAAWFTQLAAHAVQVTCQTPEQAHLPKWVAARAKQNNLQLDDAANQLLCYCYEGNLLAL 182

Query: 181 AQSLEKLALLYPDGLLTLVRLEESLSRHNHFTPYHWMDALLEGKANRAQRILRQLMLEES 240
           AQ+L++L+LL+PDG LTL R+E++++   HFTP+HW+DALL  K+ R   IL+QL LE S
Sbjct: 183 AQALDRLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLSAKSKRGLHILQQLRLEGS 242

Query: 241 EPIILIRTAQKELTQLLKWQQERQQLGNLGSLFDRYRVWQNRRPLYSAALQRLPSRALLR 300
           EP+IL+RT Q+EL  L+  +++      L SLFD++RVWQNRR L + A+ RL    L +
Sbjct: 243 EPVILLRTLQRELLLLITLKRQSAHT-PLRSLFDKHRVWQNRRALITEAVNRLSHEQLRQ 301

Query: 301 LVGILTQAELLAKTQYEQPVWPILQQLSLECCN 333
            V +L +AEL  K  Y Q VW  L+ LSL  C+
Sbjct: 302 AVQLLMRAELTLKQDYGQSVWAELESLSLLLCH 334