Pairwise Alignments

Query, 156 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Vibrio cholerae E7946 ATCC 55056

Subject, 155 a.a., LSU m3Psi1915 methyltransferase RlmH from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  155 bits (391), Expect = 4e-43
 Identities = 72/156 (46%), Positives = 106/156 (67%), Gaps = 1/156 (0%)

Query: 1   MKIQLIAVGTKMPKWVEEGFQEYRRRFPHDMPLELVEITAGKRGKNADIARILQKEGEAM 60
           M++ ++AVG ++P W +  + +Y +RFP ++ +EL  +    RG    +  +L  E E +
Sbjct: 1   MRLLIVAVGQRVPDWAQTAYDDYAKRFPPELRVELKSVKTEPRGSKT-LETLLAAERERI 59

Query: 61  LAAVPKGNRIVTLDIPGKRWDTEELAVQLESWKLDGRDVSILIGGPEGLAPACKAAADQS 120
            AA+P+G+R+V LD  G    T+ LA QL+ W+L+G DV+++IGGP+GL PA +AAA Q 
Sbjct: 60  EAAIPRGSRVVALDERGTTLTTKALAQQLQQWQLEGDDVALVIGGPDGLEPAFRAAAHQR 119

Query: 121 WSLSPLTLPHPLVRVVMAESLYRAWSITTNHPYHRE 156
             LS LTLPH +VRV++ E LYRAWS+  NHPYHRE
Sbjct: 120 IRLSDLTLPHAMVRVLLIEQLYRAWSVNANHPYHRE 155