Pairwise Alignments

Query, 156 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Vibrio cholerae E7946 ATCC 55056

Subject, 152 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Magnetospirillum magneticum AMB-1

 Score = 90.5 bits (223), Expect = 1e-23
 Identities = 56/156 (35%), Positives = 85/156 (54%), Gaps = 6/156 (3%)

Query: 1   MKIQLIAVGTKMPKWVEEGFQEYRRRFPHDMPLELVEITAGKRGKNADIARILQKEGEAM 60
           M++ + AVG       ++ F++Y RR      L+ VE      G      ++  +E E +
Sbjct: 1   MRLLIAAVGKAKAGPEQDLFRQYCRRLSPPPVLKEVEEKRPLAGP-----QLKAREAELL 55

Query: 61  LAAVPKGNRIVTLDIPGKRWDTEELAVQLESWKLDG-RDVSILIGGPEGLAPACKAAADQ 119
           LA +P+G ++V LD  G+   + + A +L  W+  G +DV+ LIGG +G   A +  AD 
Sbjct: 56  LATLPEGAKVVALDEKGRDIGSVDFAHRLRDWRDSGCQDVAFLIGGADGHGDAVRERADL 115

Query: 120 SWSLSPLTLPHPLVRVVMAESLYRAWSITTNHPYHR 155
             S   +T PH LVR ++AE L+RA SI T HPYHR
Sbjct: 116 LLSFGRMTWPHMLVRALLAEQLWRAHSILTGHPYHR 151