Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 665 a.a., penicillin-binding protein 2 from Rhodanobacter sp000427505 FW510-R12

 Score =  529 bits (1362), Expect = e-154
 Identities = 279/617 (45%), Positives = 386/617 (62%), Gaps = 10/617 (1%)

Query: 2   LRQHTPIRDHQAETHLFRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIK 61
           ++    I+D + E+ LFR RA+  FV I++C+ LLV     +Q+ ++ ++ TRS  NR+K
Sbjct: 1   MKPRRSIKDPRGESLLFRRRALAGFVLIVLCLCLLVGRFVFLQVMRHDEFVTRSQANRVK 60

Query: 62  VVPIAPNRGLIFDRNGVLLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAFE 121
              I P RGLI+DRNGVLLA+N P F LEV+PE+V +M   +ARL +++ + P  L AF 
Sbjct: 61  PRAIPPARGLIYDRNGVLLADNVPAFRLEVVPEQVKDMPALLARLGEVVPLDPGDLDAFR 120

Query: 122 KERKQTRRFNSVPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVS 181
           K+ KQ+RRF SVPL   LT+DE+A+F+VN+ +FPGV V   L R YP   +  HV+GYV 
Sbjct: 121 KQLKQSRRFESVPLKLHLTEDEIARFAVNRWRFPGVDVVPYLTRRYPLRGLFAHVVGYVG 180

Query: 182 RINDKDLERLDKEGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLK 241
           RI+  DLERLD +     YQ T  +G+ GIER YE++LHGT GY+ +EVN+ GR  R L+
Sbjct: 181 RIDADDLERLDPK----RYQGTSHVGRSGIERSYENILHGTPGYELLEVNADGRTQRVLE 236

Query: 242 YVPPIPGKDIVLNLDIELQLYAYKLLEGRRGSIVALDPKDNGVLAMASSPSYDPNAFVHG 301
              P PG+++ L+LD+ LQ  A    EGR G+ VA+DP++  VLAM S PS+DPN FV+G
Sbjct: 237 THAPTPGRNLYLSLDVRLQKAAEAAFEGRPGAAVAIDPRNGQVLAMVSVPSFDPNLFVNG 296

Query: 302 ISGKAYSDLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWRI 361
           I    Y+ L ND  +PL NR   G+YPPGSTVKP I ++ L+ G+ TP  T    G + I
Sbjct: 297 IGQADYAALTNDPEKPLYNRALRGVYPPGSTVKPLIGLAGLETGMRTPQDTVVSTGVFYI 356

Query: 362 PNTDTRPFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGI 421
           P    R +RD  R G GRVD++ ++E+SV+T+FY++A DMGID+ S +M +FGFG  TGI
Sbjct: 357 PG-QQRGYRDDQRGGVGRVDLVGAIEQSVNTYFYKLALDMGIDRFSGYMGKFGFGRPTGI 415

Query: 422 DIYEESKANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKVI 481
           D+  ES   +P+REWK A  + PWY G+T+  GIGQGYW  TP+Q+  A +    HG   
Sbjct: 416 DLVGESSGVLPSREWKAANFRQPWYPGETVIAGIGQGYWAVTPLQLGHAIATFAGHGVPY 475

Query: 482 APHLLRATIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARRAFQ 541
           AP L  AT   G   + Q      + P +   P   WD+   GM  V +GA+GT R+   
Sbjct: 476 APRLAMAT-QGGVNAAPQPLANPPSGPSVIRKPAD-WDVVNQGMQQVIYGARGTGRQLGV 533

Query: 542 NMPYESAGKSGTAQVFGLAEGQKYNASELAEHL--HDHALFTGFAPVKDPKVIVTFVLEN 599
             PY  AGKSGTA+ F     + Y+ +   E+L     A F  +AP  +P++ V  +LE+
Sbjct: 534 GFPYLMAGKSGTAERFS-RRSEAYDTNRSTEYLATRHRAWFVAYAPADNPQIAVAAILES 592

Query: 600 GGGGSSNGAPVVRQIFD 616
           G  G+S   P+VR I D
Sbjct: 593 GAWGASAAGPIVRTILD 609