Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 632 a.a., penicillin-binding protein 2 from Pseudomonas simiae WCS417

 Score =  571 bits (1471), Expect = e-167
 Identities = 288/620 (46%), Positives = 409/620 (65%), Gaps = 13/620 (2%)

Query: 2   LRQHTPIRDHQAETHLFRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIK 61
           + Q   I+DH+ +  L R+R +   + ++  +G+L+  LY +Q+ QY  + T S +NR+ 
Sbjct: 1   MTQPIRIKDHEKDARLVRSRVVFGAIMVVALLGVLIARLYFLQVIQYDYHSTLSENNRVH 60

Query: 62  VVPIAPNRGLIFDRNGVLLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAFE 121
           V PI P RGLIFDRNGV++A+NRP F+L +  E+  + ++ +  + ++++++PE  A FE
Sbjct: 61  VQPIPPTRGLIFDRNGVVVADNRPSFSLSMTRERSGDWQQILDVIVEVLQLTPEDRAIFE 120

Query: 122 KERKQTRR-FNSVPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYV 180
           K  KQ RR F  VP+L +LT++++A+ +VNQ + PGV V A L R+YP G    H +GY+
Sbjct: 121 KRMKQGRRPFEPVPILFELTEEQIARIAVNQFRLPGVEVVAQLVRHYPQGPHFAHSVGYM 180

Query: 181 SRINDKDLERLDKEGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTL 240
            RIN+K+L+ LD      NY  T  IGK GIER+YE  LHG  GY+EVE N+RGRV+R L
Sbjct: 181 GRINEKELKTLDP----VNYSGTHHIGKTGIERFYEPELHGQVGYEEVETNARGRVLRVL 236

Query: 241 KYVPPIPGKDIVLNLDIELQLYAYKLLEGRRGSIVALDPKDNGVLAMASSPSYDPNAFVH 300
           K   P+PGKDIVL+LDI+LQ  A   L GRRG++VALDPK   VLAM S PS+DPN FV 
Sbjct: 237 KRTDPVPGKDIVLSLDIKLQEAAEMALGGRRGAVVALDPKTGEVLAMVSQPSFDPNLFVT 296

Query: 301 GISGKAYSDLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWR 360
           GIS KAY++L +   RPL NR   G+YPPGST+KP +A++ L  G++T ++   DPGY+ 
Sbjct: 297 GISFKAYAELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDAGVVTASSRVFDPGYYM 356

Query: 361 IPNTDTRPFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTG 420
           +PN D + +R+W R G G VD+  ++  S DT+FY +A+ +GID+LS++M +FG G    
Sbjct: 357 LPNYDHK-YRNWNRTGDGYVDLDTAIMRSNDTYFYDLAHKLGIDRLSAYMGKFGLGQKVS 415

Query: 421 IDIYEESKANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKV 480
           +D++EES   MP+REWK A  +  W+ G+T+ +GIGQGY  ATP+Q+A+AT+++ N G  
Sbjct: 416 LDMFEESPGLMPSREWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALVANKGIW 475

Query: 481 IAPHLLRATIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARRAF 540
             PHL + TI+       +K  +    P I       W    HGM  V HGA+GTAR+A 
Sbjct: 476 NRPHLAK-TIEG------EKPVDDNPIPDIVLRDASDWTKVNHGMQQVMHGARGTARKAA 528

Query: 541 QNMPYESAGKSGTAQVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTFVLENG 600
               Y  AGKSGTAQV  + +G+KY+ +++ E   DHALF GFAP  DPK++V  ++ENG
Sbjct: 529 VGAQYRIAGKSGTAQVVAIKQGEKYDRTKVQERHRDHALFVGFAPADDPKIVVAVMVENG 588

Query: 601 GGGSSNGAPVVRQIFDHVIL 620
             GS   APVVRQ+ D  +L
Sbjct: 589 ESGSGVAAPVVRQVMDAWLL 608