Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., penicillin-binding protein 2 from Pseudomonas simiae WCS417

 Score =  516 bits (1330), Expect = e-151
 Identities = 266/626 (42%), Positives = 384/626 (61%), Gaps = 29/626 (4%)

Query: 7   PIRDHQAETHLFRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIKVVPIA 66
           PI+DH+ E  L   R +   + ++     LV  +Y +Q+ Q+  + T S +NR+ V+PI 
Sbjct: 6   PIKDHEKENRLVNKRLLACALLVIGITCALVARMYFLQVVQFDYHSTISENNRVHVLPIT 65

Query: 67  PNRGLIFDRNGVLLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAFEKERKQ 126
           P RGLI+DRNGV+LA+NRP +NL +  E+  +++  +  +  L+ +  E  A F+K  KQ
Sbjct: 66  PTRGLIYDRNGVVLADNRPSYNLTITRERTTDLKGELDAIVSLLHLPAEDRAVFDKALKQ 125

Query: 127 TRR-FNSVPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVSRIND 185
            R  F  V L  +LT++++A  +VN+ + PGV V     R+YP G    H IGYV RIN+
Sbjct: 126 ARHPFVPVTLFYELTEEQIALLAVNEFRLPGVDVEPQFVRHYPLGAHFAHSIGYVGRINE 185

Query: 186 KDLERLDKEGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLKYVPP 245
           K+ + LD       Y+ T+ IGK GIER+YE  LHG  GY+EVE N++GRV+R LK+  P
Sbjct: 186 KESKALDS----VEYRGTQSIGKTGIERFYESELHGHVGYEEVETNAQGRVLRVLKHTDP 241

Query: 246 IPGKDIVLNLDIELQLYAYKLLEGRRGSIVALDPKDNGVLAMASSPSYDPNAFVHGISGK 305
           IPGK+IVL+LD+ LQ  A + L  RRGS+VALDP+   VLAM S PS+DPN FV GIS K
Sbjct: 242 IPGKNIVLSLDVHLQEAAEEALGDRRGSVVALDPQTGEVLAMVSKPSFDPNLFVTGISFK 301

Query: 306 AYSDLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWRIPNTD 365
            Y+ L +   RPL NR   G+Y PGST+KP +A++ L  G++T  T   DPGY+++P+ D
Sbjct: 302 EYAALHDSIDRPLFNRVLRGLYAPGSTIKPEVAIAGLDSGVVTAQTRVFDPGYYQLPDFD 361

Query: 366 TRPFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGIDIYE 425
            + +R+W   G G VD+  ++  S DT+FY +A+ +GID+L  ++  FG G    +D++E
Sbjct: 362 HK-YRNWNHSGDGWVDMDAAIMRSNDTYFYDLAHKLGIDRLHDYLAEFGLGQKVSLDMFE 420

Query: 426 ESKANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKVIAPHL 485
           ES   MP++ WK A  + PW+ G+T+ +GIGQGY   TP+Q+A+AT+++ N G    PHL
Sbjct: 421 ESAGLMPSQAWKRATRRQPWFPGETVILGIGQGYMQVTPLQLAQATALIANKGVWNRPHL 480

Query: 486 LRATIDNGEQFSTQKETEYTTYPPIDGVP--------KKYWDMAIHGMYLVNHGAKGTAR 537
            +    NG              PP+D  P         + W+   HGM LV H  +G AR
Sbjct: 481 AKTI--NG-------------VPPVDENPMPNVVLKDPRDWEQVNHGMQLVMHDPRGIAR 525

Query: 538 RAFQNMPYESAGKSGTAQVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTFVL 597
            A Q   Y  AGKSGTAQV  + +G++YN  +  E   D+ALF GFAP + PK++++ ++
Sbjct: 526 AAAQGAQYRIAGKSGTAQVVAIKQGERYNREKTLERHRDNALFVGFAPAEHPKIVISVMI 585

Query: 598 ENGGGGSSNGAPVVRQIFDHVILGKK 623
           ENG  G     PVVRQI D  +L ++
Sbjct: 586 ENGEAGGRVAGPVVRQIMDAWLLDQE 611