Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., penicillin-binding protein 2 from Variovorax sp. OAS795

 Score =  147 bits (372), Expect = 1e-39
 Identities = 154/621 (24%), Positives = 266/621 (42%), Gaps = 96/621 (15%)

Query: 13  AETHLFRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIKVVPIAPNRGLI 72
           ++T ++R++ IV+  GI     +L      +Q+     ++ +      + + +  NRG I
Sbjct: 16  SKTPVWRSKFIVA--GIAFGFVVLAGRAAYVQVFNNSFFQRQGEVRFARTLELPANRGRI 73

Query: 73  FDRNGVLLAENRPVFNLEVIPEKVPNME-ETIARLQQLIEISPEKLAAFEKERKQTRRFN 131
            DRNG++LA +    ++  IPE V   + E  A+L+Q+ ++       F+K+ +   +  
Sbjct: 74  LDRNGLILASSVVAPSIWAIPEDVERDDPEVRAKLKQVAKLLEMPQKDFDKKLEDEDK-- 131

Query: 132 SVPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVSRINDKDLERL 191
           +   + +  D+ +AK  +      G+      KR YP GE   HV+G+ +          
Sbjct: 132 TFVWIKRQVDEPIAK-QIAALNLKGIYQRKEYKRQYPEGEAAAHVVGFTN---------- 180

Query: 192 DKEGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTL-KYVPPIPGKD 250
                        D G+ GIE  +   L G AG + V  +  GRV+  + + VPP+ GKD
Sbjct: 181 -----------VEDNGQEGIELSFNKDLAGKAGSRRVIKDRLGRVVEGVGEQVPPVDGKD 229

Query: 251 IVLNLDIELQLYAYKLL-------EGRRGSIVALDPKDNGVLAMASSPSYDPNAFVHGIS 303
           I L++D ++Q +AY+ L         + GS+V LD     VLA+A+ PSY P+       
Sbjct: 230 IQLSVDSKVQFFAYQKLRDAVTARRAKAGSVVVLDAVTGEVLALANYPSYVPD------- 282

Query: 304 GKAYSDLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNT-TRNDPGYWRIP 362
                +L  ++ R   NR     + PGST+KP     AL+ G + P+T     PG ++I 
Sbjct: 283 --RRQNLTGEQLR---NRALTDTFEPGSTMKPITVGMALEAGRVKPSTLIETGPGRFQIG 337

Query: 363 N---TDTRPFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLT 419
               +DT          +G + +   +++S +    +IA  M   ++       G+G   
Sbjct: 338 GFTISDTH--------NYGTLTVEGVIQKSSNVGALKIAQKMSPHEMWDTYTALGYGQKP 389

Query: 420 GIDIYEESKANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGK 479
            I         +  R WK       W   +   +  G G  +A+  Q+A + +   + G 
Sbjct: 390 QIQFPGAVSGRL--RPWK------TWKPVEQATMAYGYGL-SASLFQMAHSYTAFAHDGA 440

Query: 480 VIAPHLLR-ATIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARR 538
           +I   +L+ AT   G Q  +                     +A+  M  +  G  GT  R
Sbjct: 441 IIPVTILKNATPPAGVQVFSSANA-----------------LAVRKMLQMAAGPGGTGTR 483

Query: 539 AFQNMPYESAGKSGTAQVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTFVLE 598
           A Q + Y   GKSGTA       G+ Y +++        A FTG AP++ P++IV  +++
Sbjct: 484 A-QTIGYSVGGKSGTAH---KQVGKGYASNKY------RAWFTGMAPIEKPRIIVAVMID 533

Query: 599 NGGGGSSNGAPVVRQIFDHVI 619
               G   G      +F  V+
Sbjct: 534 EPSDGQYFGGVAAAPVFSEVV 554