Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 699 a.a., Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) from Sphingobium sp. HT1-2

 Score =  303 bits (775), Expect = 2e-86
 Identities = 204/608 (33%), Positives = 318/608 (52%), Gaps = 37/608 (6%)

Query: 14  ETHLFRNRAIVSFVGILICMG-LLVTNLYNIQINQYQDYKTRSNDNRIKVVPIAPNRGLI 72
           ++  F  RA+V   G+   +G LLV  +  I I + + Y+  S  NR+ +  I P RG I
Sbjct: 16  QSFTFSRRAMV-VGGLQGAIGALLVGRMGWISIAENEKYQLLSESNRVNLTLIPPRRGWI 74

Query: 73  FDRNGVLLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAFEKERKQTRRFNS 132
            DRNG  LA NR  F +++IP+++ + E T+  L QL+ + P+ +   ++E  ++  F  
Sbjct: 75  VDRNGRPLANNRTDFRVDLIPQRIVDAEATVGHLAQLLSLQPDDVDRIKEELDKSAGFRP 134

Query: 133 VPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVSRINDKDLERLD 192
           V +  +LT D+ A  SV     PGV+ +    R+YP G  + H++GYV     +D ++  
Sbjct: 135 VQVADKLTYDQFAAVSVRLTDLPGVAPSQGFSRHYPAGATVGHLLGYVGAATAEDYKK-- 192

Query: 193 KEGKKANYQATRD--IGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLKYVPPIPGKD 250
              +K     T    +GK G+ER Y++ L G  G + VEV +RG+++R L   P  PG  
Sbjct: 193 ---RKDPLLITPGFKVGKDGLERAYDEHLTGKPGAKRVEVTARGKIVRELTTRPDTPGNP 249

Query: 251 IVLNLDIELQLYAYKLLEGRRGSIVALDPKDNGVLAMASSPSYDPNAFVHGISGKAYSDL 310
           I L +D  LQ YA + L  + G++V +D  +  VLA AS PS+DPN+F  GIS   +  L
Sbjct: 250 IKLTIDAGLQEYAGRRLATQSGAVVVIDCHNGDVLACASMPSFDPNSFSDGISHLEWEML 309

Query: 311 LNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWRIPNTDTRPFR 370
             D   PL N+   G+YPPGSTVKP +A++ L+ G ++P  T +  G  R+ NT    F 
Sbjct: 310 SKDDHVPLRNKVLQGLYPPGSTVKPMVALALLEAG-VSPAETVSCGGAIRVGNT---LFH 365

Query: 371 DWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGIDIYEESKAN 430
              + GHG +++  ++ +S D +FYQ+A  +G+D+++S   R G G    +    +S   
Sbjct: 366 CHKKRGHGPLNMRGAIAQSCDIYFYQMAQRIGMDRIASMARRVGMGQRFDLPFPSQSYGT 425

Query: 431 MPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKVIAPHLLRATI 490
           +P   WK+ ++   W   DT+   IGQGY    P+Q+A   + L   G+ + P+ L    
Sbjct: 426 VPDPTWKLKKYNQKWQVYDTVNATIGQGYMLINPLQMAVMAARLAT-GRQLMPNFLHGAA 484

Query: 491 DNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARRAFQNMP-YESAG 549
                            P + GVP+++       M  V +G  GT   A  ++P    AG
Sbjct: 485 --------------RPEPALVGVPEEHLVTIRDAMSAVVNGG-GTGGAARMSIPDVLIAG 529

Query: 550 KSGTAQVFGL-----AEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTFVLENGGGGS 604
           K+GTAQV  +     A G + NA  L   L DHALF GFAP  +P+  +  ++E+GG   
Sbjct: 530 KTGTAQVRRITMAERAGGVRGNAG-LPFKLRDHALFQGFAPFDNPRYAIACIIEHGGHTI 588

Query: 605 SN-GAPVV 611
            N  AP++
Sbjct: 589 RNEDAPMI 596