Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., peptidoglycan DD transpeptidase from Pseudomonas putida KT2440

 Score =  170 bits (431), Expect = 1e-46
 Identities = 164/624 (26%), Positives = 276/624 (44%), Gaps = 107/624 (17%)

Query: 18  FRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIKVVPIAPNRGLIFDRNG 77
           +R R ++  + I++  G +   + ++Q+      K + +   ++ +PI  +RGLI DRNG
Sbjct: 11  WRFRVVIGLLAIMV--GAICWRIIDLQVVDRDFLKGQGDARSLRHIPIPAHRGLITDRNG 68

Query: 78  VLLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAFEKERKQTRRFNSVPLLT 137
             LA + PV  L   P+++   +E   +L   +  +P++L   E+  +Q  +   + L+ 
Sbjct: 69  EPLAVSTPVTTLWANPKEMQASKERWPQLAAALGQNPQQL--IERLTQQANK-EFIYLVR 125

Query: 138 QLTDDEVAKFSVNQH----KFPGVSVTANLKRYYPYGEVLTHVIGYVSRINDKDLERLDK 193
            LT ++       QH    K PGV      +R+YP G+V  H++G+       DL+    
Sbjct: 126 GLTPEQ------GQHVLDLKVPGVYGLEEFRRFYPAGDVTAHMVGFT------DLD---- 169

Query: 194 EGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLKYVPPI-PGKDIV 252
                      D G+ G+E  YE+ L G  G ++V  + RGR+I+ ++       GK + 
Sbjct: 170 -----------DHGREGVELAYEEWLAGVPGKRQVIKDRRGRLIKDIQVTKNAKAGKTLA 218

Query: 253 LNLDIELQLYAYKLL-------EGRRGSIVALDPKDNGVLAMASSPSYDPNAFVHGISGK 305
           L++D+ LQ  A + L       + + GS+V +D K   VLAM + P+Y+PN         
Sbjct: 219 LSIDLRLQYLATRELRNAIAEQDAKAGSLVIMDVKTGEVLAMVNQPTYNPN--------- 269

Query: 306 AYSDLLNDKRRPLV-----NRTTLGIYPPGSTVKPFIAVSALQDGIITP-NTTRNDPGYW 359
                    RR +      NR  + ++ PGSTVKP    +ALQ G   P +     PG  
Sbjct: 270 --------NRRSMFPAAMRNRAIIDVFEPGSTVKPISMSAALQSGRWKPTDKVEVYPGSL 321

Query: 360 RIPNTDTRPFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLT 419
           +I        +D  R     +D+   L  S +    +IA+D+G + +   M + G G  T
Sbjct: 322 QI---GRYTIKDVSRSEGPILDLTGILINSSNVGMSKIAFDIGGEAIYRVMSQVGLGQYT 378

Query: 420 GIDIYEESKANMPT-REWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHG 478
           G+    E   N+P  REW+ A         +T  +  G G  + T +Q+  A + L N G
Sbjct: 379 GLGFPGERVGNLPNHREWRKA---------ETATLSYGYGV-SVTALQLVHAYAALANDG 428

Query: 479 KVIAPHLLRATIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARR 538
           K++   +++                  T   +  +PK+  +     +  V    +G  R 
Sbjct: 429 KMVPLSIIKVD---------------KTPEAVQAIPKEVAETVQGMLQQVIEAPRGVFRA 473

Query: 539 AFQNMPYESAGKSGTAQVFGL-AEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTFVL 597
             Q   Y  AGKSGTA+   + A+G   NA          +LF GF P+ DP+  +  V+
Sbjct: 474 --QVPFYHVAGKSGTARKATVGAKGYTENAY--------RSLFAGFGPMSDPRYAIVVVI 523

Query: 598 ENGGGGSSNGAPVVRQIFDHVILG 621
           +    G   G  V   +F +V+ G
Sbjct: 524 DEPRKGGYFGGLVSAPVFSNVMSG 547