Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., Peptidoglycan D,D-transpeptidase FtsI from Pseudomonas protegens RBAN4

 Score =  154 bits (389), Expect = 1e-41
 Identities = 154/614 (25%), Positives = 269/614 (43%), Gaps = 87/614 (14%)

Query: 18  FRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIKVVPIAPNRGLIFDRNG 77
           +R R ++  + +++    +   + ++Q+      K + +   ++ +PI  +RGLI DRNG
Sbjct: 10  WRFRVVLGLLAVMV--SAIAWRIIDLQVVDRDFLKGQGDARSVRHIPIPAHRGLITDRNG 67

Query: 78  VLLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAFEKERKQTRRFNSVPLLT 137
             LA + PV  L    +++   ++    L   +   P+ LA    E +  + F  + L+ 
Sbjct: 68  EPLAVSTPVTTLWANAKEMQLAKDRWPALAMALGQDPKALAE-RLEAQANKEF--IYLVR 124

Query: 138 QLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVSRINDKDLERLDKEGKK 197
            LT ++    SV   K PGV      +R+YP GEV  H++G+       D++        
Sbjct: 125 GLTPEQGQ--SVLDLKVPGVYGIEEFRRFYPAGEVTAHMVGFT------DID-------- 168

Query: 198 ANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLKYVPPI-PGKDIVLNLD 256
                  D G+ G+E  Y++ L G  G ++V  + RGR+I+ ++       GK + L++D
Sbjct: 169 -------DRGREGVELAYDEWLAGVPGKRQVIKDRRGRLIKDVQVTKNAKAGKPLALSID 221

Query: 257 IELQLYAYKLLE-------GRRGSIVALDPKDNGVLAMASSPSYDPNAFVHGISGKAYSD 309
           + LQ  A + L         + GS+V +D K   +LAM + P+Y+PN            +
Sbjct: 222 LRLQYLANRELRNAIVENGAKAGSLVIMDVKTGEILAMVNQPTYNPN------------N 269

Query: 310 LLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITP-NTTRNDPGYWRIPNTDTRP 368
             N +   + NR  + ++ PGST+K     +AL+ G   P +T    PG  ++       
Sbjct: 270 RRNLQPAMMRNRAMIDVFEPGSTMKAISMSAALETGRWKPSDTVEVYPGTLQL---GKYT 326

Query: 369 FRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGIDIYEESK 428
            RD  +     +D+   L  S +    ++A+D+G + +     + G G  TG+    E  
Sbjct: 327 IRDVSKTEGPVLDLTGILINSSNVGMSKVAFDIGGETIFRLAQKIGLGQDTGLGFPGERV 386

Query: 429 ANMPT-REWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKVIAPHLLR 487
            N+P  REW+ A         +T  +  G G  + T +Q+  A S L N+G++    L++
Sbjct: 387 GNLPNYREWRKA---------ETATLSYGYGL-SVTAIQLVHAFSALANNGRIAPLTLIK 436

Query: 488 ATIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARRAFQNMPYES 547
           +            +T  TT    + V K    M    +  V    +G  R   Q   Y  
Sbjct: 437 S-----------DKTPQTTQVIPENVAKTMQGM----LQQVIEAPRGVFRA--QVPAYHV 479

Query: 548 AGKSGTAQVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTFVLENGGGGSSNG 607
           AGKSGTA+   +           AE+ +  +LF GF P+ DP+  +  V++        G
Sbjct: 480 AGKSGTARKTSV------GTKGYAENSY-RSLFAGFGPMSDPRYAIVVVIDEPSKAGYFG 532

Query: 608 APVVRQIFDHVILG 621
             V   +F  V+ G
Sbjct: 533 GLVSAPVFSKVMSG 546