Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 627 a.a., penicillin-binding protein 2 from Magnetospirillum magneticum AMB-1

 Score =  357 bits (915), Expect = e-102
 Identities = 211/607 (34%), Positives = 326/607 (53%), Gaps = 18/607 (2%)

Query: 17  LFRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIKVVPIAPNRGLIFDRN 76
           LF  RA++   G    MG L   +Y +Q+ +   Y  ++ DNRI    +AP RGLI DRN
Sbjct: 10  LFSRRAMMLAGGKAGLMGALAARMYYLQVMEADKYAVQAEDNRISTRLLAPPRGLILDRN 69

Query: 77  GVLLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAFEKERKQTRRFNSVPLL 136
           G+ +A N+  + + V+PE+ P+++ T+  L ++I I     +   KE ++ R F  + + 
Sbjct: 70  GIAMAVNQHNYRVMVVPEQTPSLDYTLDALAKIIAIGDGDRSRIHKEVRRRRSFVPLSVR 129

Query: 137 TQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVSRINDKDLERLDKEGK 196
             LT +EVA+  VN    PGV +     RYYP   +  H++GYVS +++ +L      G 
Sbjct: 130 ENLTWEEVARVEVNAADLPGVVIDVGQSRYYPLESLGAHILGYVSAVSENEL-----SGD 184

Query: 197 KANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLKYVPPIPGKDIVLNLD 256
                    IGK G+ER Y+  L G  G   +EVNS GRVIR L+     PG D+ L LD
Sbjct: 185 PLEELPGFRIGKGGVERIYDMALRGRHGTSTLEVNSVGRVIRELERKEGEPGLDLNLTLD 244

Query: 257 IELQLYAYKLLEGRRGSIVALDPKDNGVLAMASSPSYDPNAFVHGISGKAYSDLLNDKRR 316
           ++LQ YA + L     ++V +D     V+ MAS+PS+DPN+F  G+S + + DL  + R 
Sbjct: 245 MKLQEYAAQRLGEESAAVVVMDIHTGDVVVMASTPSFDPNSFNRGLSNEEWKDLSTNPRS 304

Query: 317 PLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWRIPNTDTRPFRDWLRWG 376
           PL N+   G + PGST K   A++AL+   ITP       G+ ++    +  F  W + G
Sbjct: 305 PLTNKAIGGTFAPGSTFKMLTALAALEARDITPEMRVFCSGHTQL---GSLKFHCWKKEG 361

Query: 377 HGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGIDIYEESKANMPTREW 436
           HG  D++  ++ S D +FY+IA  +G +K++    +FG G  TGID+  E    +P + W
Sbjct: 362 HGAQDLVTGIKNSCDVYFYEIARRVGYEKIAEMAKKFGLGAPTGIDLPGEKSGIIPNKAW 421

Query: 437 KMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKVIAPHLLRATIDNGEQF 496
           K A  K PWY G+T+   IGQGY TAT MQ+A  T+ + N G  + PH+ R  I      
Sbjct: 422 KKATLKQPWYPGETLVNAIGQGYVTATAMQLATMTARIANGGYAVVPHVARDQISE---- 477

Query: 497 STQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARRA-FQNMPYESAGKSGTAQ 555
            + K     ++P +D V ++   +   GM+ V++   GTA +A         +GK+G+AQ
Sbjct: 478 KSAKSRATPSWPSLD-VSRQSLALVRKGMFAVSNEPGGTAYKARITQEGMWLSGKTGSAQ 536

Query: 556 VFGLAEGQKYNASELAEHL----HDHALFTGFAPVKDPKVIVTFVLENGGGGSSNGAPVV 611
           V  +   ++    +  + L     DHALF  +AP + P+  +  ++E+GGGGS+  AP+ 
Sbjct: 537 VRRITLRERETGVKKNDQLPWKERDHALFVAYAPEESPRYSIAVIVEHGGGGSAVAAPIA 596

Query: 612 RQIFDHV 618
           R I   V
Sbjct: 597 RDIMIEV 603