Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., Penicillin-binding protein 2 (PBP-2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  751 bits (1940), Expect = 0.0
 Identities = 357/630 (56%), Positives = 469/630 (74%), Gaps = 6/630 (0%)

Query: 2   LRQHTPIRDHQAETHLFRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIK 61
           +++    RD+ AE+ LF  RA+V+F+GIL+  G+L+ NLYN+QI ++ DY+TRSN+NRIK
Sbjct: 1   MKRQNSFRDYTAESALFVRRALVAFLGILLLTGVLIANLYNLQILRFTDYQTRSNENRIK 60

Query: 62  VVPIAPNRGLIFDRNGVLLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAFE 121
           +VPIAP+RG+I+DRNG+ LA NR ++ +E++PEKV N+++T+  L+ +++++ + +AAF+
Sbjct: 61  LVPIAPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQQTLDALRSVVDLNDDDIAAFK 120

Query: 122 KERKQTRRFNSVPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVS 181
           KER ++ RF S+P+ T LT+ +VA+F+VNQ++FPGV V    +RYYPYG  LTHVIGYVS
Sbjct: 121 KERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKGYKRRYYPYGSALTHVIGYVS 180

Query: 182 RINDKDLERLDKEGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLK 241
           +INDKD+ERLD+E K ANY AT DIGKLGIERYYED+LHG  GY+EVEVN+RGRVIR LK
Sbjct: 181 KINDKDVERLDRENKLANYAATHDIGKLGIERYYEDILHGQTGYEEVEVNNRGRVIRQLK 240

Query: 242 YVPPIPGKDIVLNLDIELQLYAYKLLEGRRGSIVALDPKDNGVLAMASSPSYDPNAFVHG 301
            VPP  G DI L LD++LQ Y   LL G R +++  DP+  GVL++ S PSYDPN FV G
Sbjct: 241 EVPPQAGHDIYLTLDLKLQQYIETLLAGSRAAVIVTDPRTGGVLSLVSMPSYDPNLFVDG 300

Query: 302 ISGKAYSDLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWRI 361
           IS K YS LLND   PLVNR T G+YPP STVKP++AVSAL  G+IT NT+  DPG+W++
Sbjct: 301 ISSKDYSGLLNDPNTPLVNRATQGVYPPASTVKPYVAVSALSAGVITRNTSLFDPGWWQL 360

Query: 362 PNTDTRPFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGI 421
           P ++ R +RDW +WGHG ++I KSLEES DTFFYQ+AYDMGID+LS WM +FG+G  TGI
Sbjct: 361 PGSEKR-YRDWKKWGHGHLNITKSLEESADTFFYQVAYDMGIDRLSEWMGKFGYGHYTGI 419

Query: 422 DIYEESKANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKVI 481
           D+ EE   NMPTREWK  R K PWYQGDTIPVGIGQGYWTATP+Q++KA  +L+N G V 
Sbjct: 420 DLAEERSGNMPTREWKQKRFKKPWYQGDTIPVGIGQGYWTATPIQMSKALMILINDGVVK 479

Query: 482 APHLLRATIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARRAFQ 541
            PHLL +T +NG+Q    +  E    PP+  +   YW++A  GMY V +   GTA + F 
Sbjct: 480 VPHLLMSTAENGKQVPWVQPHE----PPVGDIHSGYWEIAKDGMYGVANRPNGTAHKYFA 535

Query: 542 NMPYESAGKSGTAQVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTFVLENGG 601
           + PY+ A KSGTAQVFGL   + YNA ++AE L DH L T FAP  +P+V V  +LENGG
Sbjct: 536 SAPYKIAAKSGTAQVFGLKANETYNAHKIAERLRDHKLMTAFAPYNNPQVAVAIILENGG 595

Query: 602 GGSSNGAPVVRQIFDHVILGKKEEEPKAES 631
            G + G  ++RQI DH++LG       AE+
Sbjct: 596 AGPAVGT-IMRQILDHIMLGDNNTHLPAEN 624