Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 623 a.a., Penicillin-binding protein 2 (PBP-2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  606 bits (1562), Expect = e-177
 Identities = 302/625 (48%), Positives = 410/625 (65%), Gaps = 10/625 (1%)

Query: 9   RDHQAETHLFRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIKVVPIAPN 68
           +D  AE  LF  R IV+F  +++C G+L+ NLYN+QI Q+  Y TRSN+N IK++P+AP 
Sbjct: 4   KDFDAEEKLFLRRVIVAFGVVVVCFGILIFNLYNLQIRQHHYYTTRSNENDIKMLPVAPT 63

Query: 69  RGLIFDRNGVLLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAFEKERKQTR 128
           RG+I+DRNG+ L  N   +++ V P K+ +M+  + +L  ++++SP+ ++ F +  K + 
Sbjct: 64  RGIIYDRNGIPLVRNVTWYDIAVTPYKIADMDALLKQLTPIVDLSPDDISDFRRALKSSS 123

Query: 129 RFNSVPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVSRINDKDL 188
           R+  V L   LTD E+A+F+VNQ  F GV++ +   R YPYG  L HV+GYVS+IND DL
Sbjct: 124 RYRPVVLKNALTDVEIARFAVNQFHFNGVTINSYQDRQYPYGAELAHVLGYVSKINDNDL 183

Query: 189 ERLDKEGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLKYVPPIPG 248
           + LDK+G   NY A  +IGK GIERYYE+ LHG  GYQEVEV++ GR++R LK VPPI G
Sbjct: 184 KALDKKGLAENYAADHNIGKQGIERYYENDLHGKTGYQEVEVDNHGRIVRLLKDVPPIAG 243

Query: 249 KDIVLNLDIELQLYAYKLLEGRRGSIVALDPKDNGVLAMASSPSYDPNAFVHGISGKAYS 308
           K+I L LD+ LQ Y   LL G+R +++  DP D  VLAM S PSYDPN FV GIS + Y 
Sbjct: 244 KNIHLTLDLHLQEYIESLLAGQRAAVLVEDPHDGSVLAMVSMPSYDPNPFVKGISYQDYG 303

Query: 309 DLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWRIPNTDTRP 368
            LL+DK  PL+NR T G+YPP STVKP++A+SAL  GIITP TT      W +P T  R 
Sbjct: 304 KLLHDKNLPLINRVTQGLYPPASTVKPYMAMSALLCGIITPQTTFFGAPTWTLPGTQ-RH 362

Query: 369 FRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGIDIYEESK 428
           +RDW + GHG +D+ K++EES DTFFYQ+AY MGID++ + + +FG+G  TGID+ EE  
Sbjct: 363 YRDWKKTGHGMLDVTKAIEESADTFFYQVAYMMGIDRIDTMLSQFGYGKPTGIDLNEEYD 422

Query: 429 ANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKVIAPHLLRA 488
             +P+R WK   HK  WYQGDTI VGIGQGYW ATP+Q+ KA   L+N+GKVIAPHLL  
Sbjct: 423 GLLPSRAWKQRVHKKAWYQGDTISVGIGQGYWIATPIQMVKAMVALINNGKVIAPHLL-L 481

Query: 489 TIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARRAFQNMPYESA 548
             ++G+     + +   T   I      YW +    MY + +   GT  + F   PY  A
Sbjct: 482 NEESGKTVVPYRPS--GTPAQIADPASPYWGLVRQAMYGMANAPNGTGYKFFHTAPYGIA 539

Query: 549 GKSGTAQVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTFVLENGGGGSSNGA 608
            KSGT+QVF L E Q YNA  +   L DH  +T FAP K+PKV +  +LENGG      A
Sbjct: 540 AKSGTSQVFSLKENQTYNAKMIPIRLRDHVFYTAFAPYKNPKVAIALILENGGSDGVTAA 599

Query: 609 PVVRQIFDHVILGKKEEEPKAESKE 633
           P++R+I DH+       +P+A++ +
Sbjct: 600 PIMRKILDHLF------DPQADTTQ 618