Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., transpeptidase involved in peptidoglycan synthesis (penicillin-binding protein 2) (NCBI) from Escherichia coli BW25113

 Score =  750 bits (1936), Expect = 0.0
 Identities = 357/630 (56%), Positives = 470/630 (74%), Gaps = 6/630 (0%)

Query: 2   LRQHTPIRDHQAETHLFRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIK 61
           ++     RD+ AE+ LF  RA+V+F+GIL+  G+L+ NLYN+QI ++ DY+TRSN+NRIK
Sbjct: 1   MKLQNSFRDYTAESALFVRRALVAFLGILLLTGVLIANLYNLQIVRFTDYQTRSNENRIK 60

Query: 62  VVPIAPNRGLIFDRNGVLLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAFE 121
           +VPIAP+RG+I+DRNG+ LA NR ++ +E++PEKV N+++T+  L+ +++++ + +AAF 
Sbjct: 61  LVPIAPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQQTLDALRSVVDLTDDDIAAFR 120

Query: 122 KERKQTRRFNSVPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVS 181
           KER ++ RF S+P+ T LT+ +VA+F+VNQ++FPGV V    +RYYPYG  LTHVIGYVS
Sbjct: 121 KERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKGYKRRYYPYGSALTHVIGYVS 180

Query: 182 RINDKDLERLDKEGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLK 241
           +INDKD+ERL+ +GK ANY AT DIGKLGIERYYED+LHG  GY+EVEVN+RGRVIR LK
Sbjct: 181 KINDKDVERLNNDGKLANYAATHDIGKLGIERYYEDVLHGQTGYEEVEVNNRGRVIRQLK 240

Query: 242 YVPPIPGKDIVLNLDIELQLYAYKLLEGRRGSIVALDPKDNGVLAMASSPSYDPNAFVHG 301
            VPP  G DI L LD++LQ Y   LL G R ++V  DP+  GVLA+ S+PSYDPN FV G
Sbjct: 241 EVPPQAGHDIYLTLDLKLQQYIETLLAGSRAAVVVTDPRTGGVLALVSTPSYDPNLFVDG 300

Query: 302 ISGKAYSDLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWRI 361
           IS K YS LLND   PLVNR T G+YPP STVKP++AVSAL  G+IT NTT  DPG+W++
Sbjct: 301 ISSKDYSALLNDPNTPLVNRATQGVYPPASTVKPYVAVSALSAGVITRNTTLFDPGWWQL 360

Query: 362 PNTDTRPFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGI 421
           P ++ R +RDW +WGHGR+++ +SLEES DTFFYQ+AYDMGID+LS WM +FG+G  TGI
Sbjct: 361 PGSEKR-YRDWKKWGHGRLNVTRSLEESADTFFYQVAYDMGIDRLSEWMGKFGYGHYTGI 419

Query: 422 DIYEESKANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKVI 481
           D+ EE   NMPTREWK  R K PWYQGDTIPVGIGQGYWTATP+Q++KA  +L+N G V 
Sbjct: 420 DLAEERSGNMPTREWKQKRFKKPWYQGDTIPVGIGQGYWTATPIQMSKALMILINDGIVK 479

Query: 482 APHLLRATIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARRAFQ 541
            PHLL +T ++G+Q    +  E    PP+  +   YW++A  GMY V +   GTA + F 
Sbjct: 480 VPHLLMSTAEDGKQVPWVQPHE----PPVGDIHSGYWELAKDGMYGVANRPNGTAHKYFA 535

Query: 542 NMPYESAGKSGTAQVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTFVLENGG 601
           + PY+ A KSGTAQVFGL   + YNA ++AE L DH L T FAP  +P+V V  +LENGG
Sbjct: 536 SAPYKIAAKSGTAQVFGLKANETYNAHKIAERLRDHKLMTAFAPYNNPQVAVAMILENGG 595

Query: 602 GGSSNGAPVVRQIFDHVILGKKEEEPKAES 631
            G + G  ++RQI DH++LG    +  AE+
Sbjct: 596 AGPAVGT-LMRQILDHIMLGDNNTDLPAEN 624