Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 574 a.a., peptidoglycan synthase from Erwinia tracheiphila SCR3

 Score =  125 bits (315), Expect = 4e-33
 Identities = 143/621 (23%), Positives = 248/621 (39%), Gaps = 92/621 (14%)

Query: 12  QAETHLFRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIKVVPIAPNRGL 71
           QA+T     R  +  +G+  C+ LL+  + ++Q+  +   +  ++   ++ V +  NRG 
Sbjct: 12  QAKTPFHPVRFRLICLGVFSCLVLLLVRVADLQLINHPMLEKEADQRSLRTVTLPTNRGT 71

Query: 72  IFDRNGVLLAENRPVFNLEVIPEKV--PNMEETIARLQQL---IEISPEKLAAFEKERKQ 126
           + DRNG  LA + P  ++   PE+V   + + T A+ Q L   +E  PE +A  +     
Sbjct: 72  LLDRNGETLALSVPSRDIIADPERVLEAHPDFTSAKWQYLANVLEQRPEDIAR-QINANP 130

Query: 127 TRRFNSVPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVSRINDK 186
           +RRF  +    +L    +A+     H   G++   +  R+YP  E    +IG V   N+ 
Sbjct: 131 SRRFLYLGHKIEL---GIARDIAKLH-LAGITTVYDDSRFYPMSEATAPLIGIVGADNN- 185

Query: 187 DLERLDKEGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLKYVPPI 246
                               G  G+E+ ++ +L GT G ++   ++ G ++  + Y PP 
Sbjct: 186 --------------------GLTGLEKGFDKVLQGTPGVEKYRQDANGNIVSMINYEPPR 225

Query: 247 PGKDIVLNLDIELQLYAYKLL-------EGRRGSIVALDPKDNGVLAMASSPSYDPNAFV 299
               + L++D   Q   Y  L       +   G+ V +      +L MAS PS++PN F 
Sbjct: 226 QPPTVQLSIDKFDQYTLYTRLRDGVLLNKADSGAAVLIKIDTGEILGMASYPSFNPNNFG 285

Query: 300 HGISGKAYSDLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYW 359
                +  +  +ND             Y PGSTVKP + +  L   ++ P++  +   Y 
Sbjct: 286 DVSPAQMRNAAINDS------------YEPGSTVKPLVVMEGLIRKLVRPDSLLDTTPY- 332

Query: 360 RIPNTDTRPFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLT 419
                +    RD   W   R+ +   L++S D     IA  M  + L +    FG G  T
Sbjct: 333 ---RVNGHLIRDVGHW--PRLTMTGILQKSSDIGVSHIALAMPAEVLVNTYRSFGLGKPT 387

Query: 420 GIDIYEESKANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGK 479
           G+ +  ES    P        H+  W   +      G G    TP+QIA   + L + G 
Sbjct: 388 GLGLTGESVGYFPL-------HRERWADIERATFSFGYGL-RVTPLQIAHEYATLGSFGI 439

Query: 480 VIAPHLLRATIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARRA 539
                + + T                  PP+ G+     D     ++++   A       
Sbjct: 440 YRPLSITKVT------------------PPVIGMRVADEDTVRLVVHMMESDALPGGSGV 481

Query: 540 FQNMP-YESAGKSGTAQVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTFVLE 598
              +P Y  A K+GTA+  G     KY+   +           G AP  DP+V +  ++ 
Sbjct: 482 RAAVPGYRLAIKTGTAEKMG--SSGKYDGGYI-------NYTAGVAPASDPQVALVIMIN 532

Query: 599 NGGGGSSNGAPVVRQIFDHVI 619
           +   G   G  V   +F ++I
Sbjct: 533 HPTAGDHFGGSVAAPVFGNII 553