Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 607 a.a., Peptidoglycan D,D-transpeptidase FtsI from Acinetobacter radioresistens SK82

 Score =  148 bits (374), Expect = 6e-40
 Identities = 161/624 (25%), Positives = 265/624 (42%), Gaps = 112/624 (17%)

Query: 29  ILICMGLLVTNLYNIQINQYQDYKTRSNDNRIKVVPIAPNRGLIFDRNGVLLAENRPVFN 88
           +L+C  +L+   + +QI      + ++N N ++   +   RG+I DR+GV LA + P+  
Sbjct: 36  VLLCFVILIARAFYVQIINKDFLQNKANANILRTESLKAMRGVISDRHGVPLAISTPIMK 95

Query: 89  LEVIP-----------------EKVPNMEETIARLQQLIEISPEKLA------AFEKERK 125
           + + P                 +K PN  +   +L     ++ ++LA        E +RK
Sbjct: 96  IVIDPRDYFDNKKLYDEITAELKKDPNNRKLKRQLPDK-NLNLDELADAVGIDRAELKRK 154

Query: 126 QTRRFNSVPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVSRIND 185
              R  S  L+ +          + +  F GV    N KRYYP  +    +IG  +    
Sbjct: 155 LNERPRSRYLVLKKEVPPQQADLIVKRDFQGVYAEKNYKRYYPQPQPNAQIIGLTN---- 210

Query: 186 KDLERLDKEGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLKYVPP 245
                            +   G  G+E      L G  G Q+V  + RG  ++  + +  
Sbjct: 211 -----------------SEGTGIEGLEMQLNKRLAGVDGEQKVIRDKRGNRLKVTEVIKE 253

Query: 246 I-PGKDIVLNLDIELQLYAYKLL-------EGRRGSIVALDPKDNGVLAMASSPSYDPNA 297
           + PG++I L++D  LQ   Y+ L         R  S +A+D K   +LAM S PSY+PN 
Sbjct: 254 VEPGENITLSIDSRLQYILYRELTAAGIANNARSASAIAVDVKTGEILAMTSWPSYNPN- 312

Query: 298 FVHGISGKAYSDLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRN-DP 356
                +G A  D +        NR  + ++ PGST+KP    +AL+ G  TPNT  N   
Sbjct: 313 ---DKNGLANKDAMR-------NRGAIDMFEPGSTMKPLSVAAALESGKYTPNTIINLGS 362

Query: 357 GYWRIPNTDTRPFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFG 416
           G  R+ N   R         +G++ +   + +S +    ++A  +    L ++  R GFG
Sbjct: 363 GSMRVGNHTIRDTH-----SYGQLSVTGVIIKSSNVGVAKMALSLPYSTLPTFFKRIGFG 417

Query: 417 DLTGIDIYEESKA-NMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLV 475
             + +    ES    +P  +W ++         +   +  G G   AT +Q+ +A ++L 
Sbjct: 418 QRSAVKFPGESTGLILPPSKWNVS---------EVATMSYGYGI-NATVLQMVQAYAMLA 467

Query: 476 NHGKVIAPHLLRA-TIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKG 534
           NHG  +   L +      GEQ    K          D V      + + G         G
Sbjct: 468 NHGVKMPLSLYKLDEPPKGEQLLEPKIA--------DQVLLMMEQVTLPG---------G 510

Query: 535 TARRAFQNMP-YESAGKSGTAQVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIV 593
           TAR+A  N+P Y  AGK+GTA     A+ + Y+++E        ALF+G APV DP++ +
Sbjct: 511 TARQA--NIPGYRVAGKTGTAHKL-RADRKGYSSNEY------RALFSGVAPVSDPRLAI 561

Query: 594 TFVLENGGG---GSSNGAPVVRQI 614
             V+EN  G   G    APV  ++
Sbjct: 562 FVVVENPKGKYYGGLVAAPVFARV 585