Pairwise Alignments

Query, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 670 a.a., Peptidoglycan D,D-transpeptidase MrdA from Acinetobacter radioresistens SK82

 Score =  506 bits (1302), Expect = e-147
 Identities = 262/641 (40%), Positives = 397/641 (61%), Gaps = 27/641 (4%)

Query: 2   LRQHTPIRDHQAETHLFRNRAIVSFVGILICMGLLVTNLYNIQINQYQDYKTRSNDNRIK 61
           ++QH P+++ Q E  ++R+R  ++   +   + LL  +   +QI  Y ++ T S+ NRI+
Sbjct: 1   MKQHFPLKNEQQEKRIYRSRIFITMGIVAFFLLLLAGHYAYLQIAHYDEFSTASDKNRIR 60

Query: 62  VVPIAPNRGLIFDRNGVLLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAFE 121
           + PIAP RG I+DRNG+LLA+N PVF+  +    + ++E T+ARL  ++ ++PE +A FE
Sbjct: 61  LQPIAPARGYIYDRNGILLADNYPVFSATMSRADIEDIEATLARLTPVLSLTPEDIARFE 120

Query: 122 KERKQTRRFNSVPLLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVS 181
              K +R+   V +   LT+ ++AKFS  +++FPGV++   + RYYP+G++  HVIGYV 
Sbjct: 121 SRIKASRKTERVAIKMNLTETDIAKFSELKYQFPGVNIETQMTRYYPHGDLFAHVIGYVG 180

Query: 182 RINDKDLERLDKEGKKANYQATRDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLK 241
           RINDK+L+++DK+     Y  T  IGK+G+E+ YE+LLHG  G + VE ++ G V+R L 
Sbjct: 181 RINDKELKKIDKD----LYAGTNLIGKIGVEKSYEELLHGIPGNESVEADAHGNVLRNLG 236

Query: 242 YVPPIPGKDIVLNLDIELQLYAYKLLEGRRGSIVALDPKDNGVLAMASSPSYDPNAFVHG 301
              P+ G D+ L++D  LQ+ A + L GRRG+IVALDP+   +LA+ SSPS++PN FV G
Sbjct: 237 RKDPVRGNDLYLSIDYGLQMVATEQLAGRRGAIVALDPRTGEILALVSSPSFNPNLFVTG 296

Query: 302 ISGKAYSDLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWRI 361
           IS   YS L ++  +PL NR   G YPPGST+KP   +  +  G +  NT  +DPGY+ +
Sbjct: 297 ISHTDYSGLRDNLDQPLYNRAVQGAYPPGSTIKPMFGLGGIHYGYVDWNTAISDPGYFTL 356

Query: 362 PNTDTRPFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGI 421
           P  D+  FRD  + GHG V++ K+   S DT+FY ++Y MGI+K+++WM +FGFG+ TG+
Sbjct: 357 PG-DSHRFRDHKKTGHGMVNLHKAQNVSCDTYFYVLSYRMGIEKMNTWMRQFGFGEKTGV 415

Query: 422 DIYEESKANMPTREWKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKVI 481
           D+  ES+   P  EWKM   K  W +G+TI V IGQG +TA+P+Q+A AT++  N G  +
Sbjct: 416 DLPSESEGLYPNPEWKMRTRKAKWLKGETISVSIGQGAFTASPLQLALATAITANQGSRV 475

Query: 482 APHLLRAT-------IDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKG 534
            PH+LR T       + NG     Q           +G P+ +  M      +V+    G
Sbjct: 476 TPHVLRETRGTKTYHVHNGTNGKIQ----------FNGTPEDWIKMR---EAMVDVIQTG 522

Query: 535 TARRAFQNMPYESAGKSGTAQVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVT 594
           T +     + Y  AGK+GTAQV  +A+G++YN S L E   DH LF GFAP ++P++ + 
Sbjct: 523 TGKGIRSGLSYHIAGKTGTAQVKSIAQGKRYNESLLTERQLDHGLFVGFAPAENPEIAIA 582

Query: 595 FVLENGGGGSSNGAPVVRQIFDHVILGKKEEEPKAESKEEV 635
            V ENG  G S  A + R IFD+ ++ KKE+ P   S  ++
Sbjct: 583 VVWENGRHGGS-AAQLARPIFDYWLV-KKEKNPIRPSAHQI 621