Pairwise Alignments

Query, 373 a.a., rod shape-determining protein RodA from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., putative peptidoglycan glycosyltransferase FtsW from Xanthobacter sp. DMC5

 Score =  172 bits (436), Expect = 1e-47
 Identities = 117/358 (32%), Positives = 186/358 (51%), Gaps = 18/358 (5%)

Query: 19  IDLPLLLGVLALMGFGLVVMYSASGQSLAMMD---------RQAMRMAMALIIMVILAQI 69
           +D  LL  ++ LM  G+++  +AS    A ++         RQ + +  A ++MV  + +
Sbjct: 17  VDRALLASLVGLMVIGIILCLAASPAVAARLNIADPFHFVNRQVLFLIPAAVVMVATSFM 76

Query: 70  PPRTYESAAPILFFCGVILLVCVLLFGEISKGAQRWLDLGFVRFQPSELLKLAVPLMVAR 129
            PRT      ++F    +LL+  L+FG   KGA+RWL +  +  QPSE +K A  ++ A 
Sbjct: 77  SPRTIRRTCVVVFGVFFVLLLATLVFGPEVKGARRWLTIAGITVQPSEFIKPAFVILAAW 136

Query: 130 YIGKHALPPSFK-TLFASLVMVFVPTILIAKQPDLGTSILIAASGIFVIFLAGISWKLIT 188
              +    P    TLFA L++  V   L+ KQPD G S+LI      + FLAG+ W +  
Sbjct: 137 LFAESTKRPEMPATLFAFLLLGSVLGPLV-KQPDFGQSLLICLVWSSLFFLAGLRW-IWM 194

Query: 189 AAAVAIGAFVPVLWFFLMHEYQKTRVRTLFDPESDPLGAGYHIIQSKIAIGSGGLSGKGW 248
              V +GA    + +  +   QK R+    +P+S   G  Y I  +  +  SGG  G G 
Sbjct: 195 VGLVGVGAGGGFIAYMTVSHVQK-RINRFLNPDS---GDTYQIDAALNSFRSGGWFGTGP 250

Query: 249 LHGTQSQLEFLPERHTDFIFAVIAEEWGMIGILVLLSLYLFIIGRGLYLASHAQTSFGRM 308
             GT  ++  LP+ HTDF+FAV  EE+G+I  L++L+L+ FI+ R L  AS     F R 
Sbjct: 251 GEGTMKRM--LPDGHTDFVFAVAGEEFGIILCLIILALFAFILLRSLSRASKESDPFTRF 308

Query: 309 MAGSIVLSFFVYVFVNIGMVSGILPVVGVPLPLISYGGTSMVTLMAGFGILMSIHTHR 366
               + L F +   +N+ +   I P  G+ LP ISYGG+S++++  G G+L+++   R
Sbjct: 309 AITGLALLFSLQASINMAVNVHIAPAKGMTLPFISYGGSSLISIAFGMGMLLALSRKR 366